Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq26 167 5e-36 seq19 158 3e-33 seq2 122 2e-22 seq3 89.7 1e-12 >seq26 Length=329099 Score = 167 bits (184), Expect = 5e-36 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || |||||||| || |||||||| || || | |||||| | ||||| Sbjct 245257 AGGACAAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCC 245316 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| ||||| || || || || |||| || ||||||||| Sbjct 245317 TCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGATCGGGGGGAATGCCCTCCTTGTCC 245376 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||| || ||||||||||| || || |||||||| ||||| ||| Sbjct 245377 TGAATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 245436 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || ||||| ||||| || Sbjct 245437 TTGCCGGTGAGGGTCTTGAC 245456 Score = 154 bits (170), Expect = 3e-32 Identities = 148/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||||||| || ||||| || || || | ||||| | ||||| Sbjct 245550 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCC 245609 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| ||||| || ||||| || |||| || ||||||||| Sbjct 245610 TCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 245669 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||| || ||||||||||| || || ||||| |||||||| ||| Sbjct 245670 TGAATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTC 245729 Query 211083 TTTCCCGTGA 211092 || ||||||| Sbjct 245730 TTGCCCGTGA 245739 Score = 150 bits (166), Expect = 4e-31 Identities = 163/215 (76%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| |||||| ||| || |||||||| || || ||||| | || || Sbjct 244801 AGGACAAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCC 244860 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||||||||| || || || || |||| || ||||||||| Sbjct 244861 TCCAGCTGCTTACCAGCAAAGATAAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCC 244920 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 || ||||| || ||||| ||||||||||| ||| ||| ||||| || |||||| Sbjct 244921 TGAATCTTGGACTTGACGTTGTCGATGGTGTC---GCTCGATTCCACCTCCAGCGTGATC 244977 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || | |||||| || || | ||||| Sbjct 244978 GTCTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 245012 Score = 145 bits (160), Expect = 2e-29 Identities = 162/215 (75%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || || ||||| || |||||||| || || ||||||| || || Sbjct 245029 AGCACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTCCGGCCGTCC 245088 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || || || || || || || | || ||||||||| Sbjct 245089 TCAAGCTGCTTGCCGGCAAAGATGAGTCGCTGCTGATCCGGGGGGATACCCTCCTTGTCC 245148 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 ||||||||| || ||||| |||||||| || ||| ||| |||||||| |||||| Sbjct 245149 TGGATCTTTGACTTGACGTTGTCGATGGTATC---GCTCGATTCCACCTCGAGCGTGATC 245205 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| || || | |||||| Sbjct 245206 GTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 245240 >seq19 Length=692283 Score = 158 bits (174), Expect = 3e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||| ||| || |||||||| || || ||||| | ||||| Sbjct 74184 AGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 74243 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || ||||| || || | || ||||||||| Sbjct 74244 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 74303 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| || || ||||| || ||||||||| Sbjct 74304 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 74363 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || |||||||| ||||| || || | |||||| || Sbjct 74364 TTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 74398 >seq2 Length=2502268 Score = 122 bits (134), Expect = 2e-22 Identities = 141/189 (75%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | ||||| | ||||| || ||||||||||| |||||||| Sbjct 2444021 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 2443962 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || || || || || || | || ||||||||||||||||| || || || ||| Sbjct 2443961 AATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2443902 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106 || ||||| ||| || ||||| || ||||| ||||| ||||| || ||||| || | Sbjct 2443901 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA-- 2443844 Query 211107 ACCTGCATT 211115 | ||||||| Sbjct 2443843 AACTGCATT 2443835 >seq3 Length=2036465 Score = 89.7 bits (98), Expect = 1e-12 Identities = 183/271 (68%), Gaps = 6/271 (2%) Strand=Plus/Plus Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149 |||||| ||||||||||||| |||| |||||| ||||| |||||||| | || Sbjct 914982 GTTCTTCTGGTTGCTCTTTCGGTTGCA---GGCATCCTTGTAGAGCATGAAGGGGTTGCC 915038 Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209 ||| | || || | | ||| | ||| |||| ||| || |||| ||||| Sbjct 915039 AGTCTCCGTCTGGGCTTCCAAGATGGAGTACCACAGCTTCTGCGCCCGGATGGTCTTACG 915098 Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269 |||| || | | ||| ||||||| ||| || ||||||| || |||||| ||| Sbjct 915099 ACCTTTGCCCTGTTGCTCATACTTTTCGTACAGAGCCTCGAACTCATCGCCATAGCAATC 915158 Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329 | | || ||||| || |||||||| | ||| |||| | || | | || || || Sbjct 915159 AGCCAGGCCGGGGCATTCGTTGGGGCACATGAGGGTCCAGTCGCCATTCTTCTCGACACG 915218 Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCA 178360 ||||||||||| || | | |||| | |||| Sbjct 915219 CTTCATGAAGAGATCGGGGATCCACAGGGCA 915249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151346528060