Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tolypocladium_20sp._20Salcha_20MEA-
2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq11 107 1e-18
seq5 105 5e-18
>seq11
Length=970842
Score = 107 bits (118), Expect = 1e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 27094 ATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACG 27153
|||| ||| ||||||| | ||||| | ||| || || ||| |||| || |||
Sbjct 258878 ATCCCCAGCTCGGGAAAGTCCCGTGGCTCGCGCTCCAGTTGCTCCTTGAGCGCATCAACG 258937
Query 27154 TGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCC 27212
|| || || |||||||| |||||||||| | ||| | || || || || | ||| |
Sbjct 258938 TGGTCGAGATAGACGTGGGCGTCTCCCATGACGTGCGTCAGGCTG-CCGGGCACCAGCTC 258996
Query 27213 GGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCC 27272
| || || || | ||||| ||| || | | ||||||||| ||||| || || || ||
Sbjct 258997 GCACACATGGGCAAGCATGTGCGTCAGCAACGCGTAGCTGGCAATGTTGAACGGGACGCC 259056
Query 27273 GAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308
||| |||||||| | ||||||||||| ||||||||
Sbjct 259057 GAGGCCCATGTCGCAGGACCTCTGGTATAGCTGACA 259092
Score = 102 bits (112), Expect = 6e-17
Identities = 270/406 (67%), Gaps = 20/406 (5%)
Strand=Plus/Plus
Query 27327 TACGTAAAACTG---ACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 27383
|||||||||||| | | ||| ||||| || || || |||||| || ||| ||
Sbjct 259192 TACGTAAAACTGGGCAAACATG---TGGCAAGGCGGCAGGGCCATGCTCGTCAGGTCCTT 259248
Query 27384 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTC 27440
|||||||| || ||| ||| || || | ||| | || || ||| | || |
Sbjct 259249 CGGGTTCCACGCAGACATGATTATACGGCGGTCGTAGGGCTTCGTCCGCAGCTTGTGTAT 259308
Query 27441 CACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGT 27499
|||| || || ||||| || || ||| |||| ||||||| | || ||| ||
Sbjct 259309 CACGTCG----GCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGTCTTCGCATCCACGT 259364
Query 27500 ACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCC 27559
|| | || || || |||| ||| ||||||||||| || || |||| || || |||| |
Sbjct 259365 ACGCGGCGCCAAAGTGCCGCCACTGGAACCCGTAGACGGGCCCCAAATCGCCAACTTCTC 259424
Query 27560 TGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA 27619
|||| | ||| ||| | || || | || |||||| ||||||| ||||| |
Sbjct 259425 GGTGCGACAGGCCGACGCCGTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAAATCTTGA 259484
Query 27620 CCCCCTTCTCGGAGAGCTC---TTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCT 27676
| || |||| ||| | | ||| | ||| |||| || ||||||||||||||
Sbjct 259485 CGCCGGCCTCGCTCAGCGCGAGTGAGGACGTGTTGG--CCTC-GATGAACCACAGCAGCT 259541
Query 27677 CCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722
| | |||||||| ||| ||||| | ||| || || ||||| ||
Sbjct 259542 CGGCGACGACGGCTTTCAGGAAGACGCGCTTCGTGGTCAGGAGTGG 259587
>seq5
Length=1590114
Score = 105 bits (116), Expect = 5e-18
Identities = 135/180 (75%), Gaps = 6/180 (3%)
Strand=Plus/Minus
Query 48510 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTC-CT 48568
|||||||||| || || | ||| ||| | ||| |||| || |||||||||||||| |
Sbjct 14019 CGTCAAGGTGCGGGTGCGAACCACCAAGATCCCCCAGATCGGAGACAAGTTTGCGTCTCG 13960
Query 48569 TCACGGCGCAAAAGGGGAC-ATGTG-GAGCCGTCCTGACCCAGGAGGACATGCCCTTCGA 48626
|||||| |||||||| || || | | | ||| | ||| | ||||||||||| ||
Sbjct 13959 TCACGGT-CAAAAGGGCACCATCGGCGTGACGTACCGAC--AAGAGGACATGCCGTTTAC 13903
Query 48627 CAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 48686
| ||| || ||| ||||||| ||||||||||||||||||| |||| || | |||||
Sbjct 13902 GAGGGAGGGCGTGACGCCCGACATCATCATCAACCCCCACGCTATTCCGTCGCGAATGAC 13843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369507001851764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |