Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq11 107 1e-18 seq5 105 5e-18 >seq11 Length=970842 Score = 107 bits (118), Expect = 1e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 27094 ATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACG 27153 |||| ||| ||||||| | ||||| | ||| || || ||| |||| || ||| Sbjct 258878 ATCCCCAGCTCGGGAAAGTCCCGTGGCTCGCGCTCCAGTTGCTCCTTGAGCGCATCAACG 258937 Query 27154 TGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCC 27212 || || || |||||||| |||||||||| | ||| | || || || || | ||| | Sbjct 258938 TGGTCGAGATAGACGTGGGCGTCTCCCATGACGTGCGTCAGGCTG-CCGGGCACCAGCTC 258996 Query 27213 GGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCC 27272 | || || || | ||||| ||| || | | ||||||||| ||||| || || || || Sbjct 258997 GCACACATGGGCAAGCATGTGCGTCAGCAACGCGTAGCTGGCAATGTTGAACGGGACGCC 259056 Query 27273 GAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308 ||| |||||||| | ||||||||||| |||||||| Sbjct 259057 GAGGCCCATGTCGCAGGACCTCTGGTATAGCTGACA 259092 Score = 102 bits (112), Expect = 6e-17 Identities = 270/406 (67%), Gaps = 20/406 (5%) Strand=Plus/Plus Query 27327 TACGTAAAACTG---ACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 27383 |||||||||||| | | ||| ||||| || || || |||||| || ||| || Sbjct 259192 TACGTAAAACTGGGCAAACATG---TGGCAAGGCGGCAGGGCCATGCTCGTCAGGTCCTT 259248 Query 27384 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTC 27440 |||||||| || ||| ||| || || | ||| | || || ||| | || | Sbjct 259249 CGGGTTCCACGCAGACATGATTATACGGCGGTCGTAGGGCTTCGTCCGCAGCTTGTGTAT 259308 Query 27441 CACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGT 27499 |||| || || ||||| || || ||| |||| ||||||| | || ||| || Sbjct 259309 CACGTCG----GCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGTCTTCGCATCCACGT 259364 Query 27500 ACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCC 27559 || | || || || |||| ||| ||||||||||| || || |||| || || |||| | Sbjct 259365 ACGCGGCGCCAAAGTGCCGCCACTGGAACCCGTAGACGGGCCCCAAATCGCCAACTTCTC 259424 Query 27560 TGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA 27619 |||| | ||| ||| | || || | || |||||| ||||||| ||||| | Sbjct 259425 GGTGCGACAGGCCGACGCCGTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAAATCTTGA 259484 Query 27620 CCCCCTTCTCGGAGAGCTC---TTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCT 27676 | || |||| ||| | | ||| | ||| |||| || |||||||||||||| Sbjct 259485 CGCCGGCCTCGCTCAGCGCGAGTGAGGACGTGTTGG--CCTC-GATGAACCACAGCAGCT 259541 Query 27677 CCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 | | |||||||| ||| ||||| | ||| || || ||||| || Sbjct 259542 CGGCGACGACGGCTTTCAGGAAGACGCGCTTCGTGGTCAGGAGTGG 259587 >seq5 Length=1590114 Score = 105 bits (116), Expect = 5e-18 Identities = 135/180 (75%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 48510 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTC-CT 48568 |||||||||| || || | ||| ||| | ||| |||| || |||||||||||||| | Sbjct 14019 CGTCAAGGTGCGGGTGCGAACCACCAAGATCCCCCAGATCGGAGACAAGTTTGCGTCTCG 13960 Query 48569 TCACGGCGCAAAAGGGGAC-ATGTG-GAGCCGTCCTGACCCAGGAGGACATGCCCTTCGA 48626 |||||| |||||||| || || | | | ||| | ||| | ||||||||||| || Sbjct 13959 TCACGGT-CAAAAGGGCACCATCGGCGTGACGTACCGAC--AAGAGGACATGCCGTTTAC 13903 Query 48627 CAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 48686 | ||| || ||| ||||||| ||||||||||||||||||| |||| || | ||||| Sbjct 13902 GAGGGAGGGCGTGACGCCCGACATCATCATCAACCCCCACGCTATTCCGTCGCGAATGAC 13843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369507001851764