Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Salcha_20MEA- 2_20[genbank_20GCA_5F000750145.2_202015-03-02] 44 sequences; 30,832,988 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq26 152 1e-31 seq19 150 4e-31 seq2 136 1e-26 >seq26 Length=329099 Score = 152 bits (168), Expect = 1e-31 Identities = 153/199 (77%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || ||||| || || || ||||||||||||||||| || |||||||||| Sbjct 245458 TCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATCG 245399 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || || || |||||||||||||| || || || || || || ||||| || || | Sbjct 245398 ACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGATCAGCAGCGCCTGA 245339 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||||||||||| |||||||| ||||| | || ||| |||| || ||| |||| || | Sbjct 245338 TCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCCGACTACAACATCCAGAAGG 245279 Query 178111 AATCAACACTGCATCTTGT 178129 | || || || || ||||| Sbjct 245278 AGTCCACGCTCCACCTTGT 245260 Score = 149 bits (164), Expect = 2e-30 Identities = 159/209 (76%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || ||||| || || || || || || |||||||| |||||||||||| ||| Sbjct 245237 CAGATCTTCGTCAAGACCCTGACGGGCAAGACGATCACGCTCGAGGTGGAATCGAGC--- 245181 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 || |||||||| |||||||| |||||| |||||||| || || ||||| ||||| ||| Sbjct 245180 GATACCATCGACAACGTCAAGTCAAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAG 245121 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || ||||| ||||| ||||| || ||||| || || || |||| || ||| || ||| Sbjct 245120 CAGCGACTCATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGGACCCTCAGCGACTACAAC 245061 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || |||||||| || Sbjct 245060 ATCCAGAAGGAGTCTACCCTGCATCTGGT 245032 Score = 131 bits (144), Expect = 4e-25 Identities = 155/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| ||||| || ||| | || || || |||||||| || ||||||||| ||| Sbjct 245009 CAAATCTTCGTCAAGACTTTGACTGGCAAGACGATCACGCTGGAGGTGGAATCGAGC--- 244953 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||||||||| |||||||| |||||||||||||| || || || || ||||| ||| Sbjct 244952 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAG 244893 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || |||||||| || || || ||||| || || || | || || ||| || ||| Sbjct 244892 CAGCGCCTTATCTTTGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTCAGCGACTACAAC 244833 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || ||||| ||||| Sbjct 244832 ATCCAGAAGGAGAGCACTCTGCACCTTGT 244804 Score = 122 bits (134), Expect = 2e-22 Identities = 139/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || ||||| || ||||| || || ||||||||||| || || || Sbjct 245739 TCACGGGCAAGACCATCACTCTTGAGGTCGAGTCGTCCGACACCATCGACAATGTGAAGT 245680 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 |||||||||||||| || || || || || |||||||| || || ||||||||||||| Sbjct 245679 CCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTGATCTTCGCCGGAA 245620 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | |||||||| ||||| | || || |||| || || |||| || || || || || | Sbjct 245619 AGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAGTCCACCCTCC 245560 Query 178123 ATCTTGT 178129 | || || Sbjct 245559 ACCTCGT 245553 >seq19 Length=692283 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || ||||||||||| |||||||| || ||| Sbjct 74392 CAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 74333 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || || ||||| ||||||||||| Sbjct 74332 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 74273 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| ||||| | || || ||| || ||| || Sbjct 74272 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATC 74213 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || || Sbjct 74212 CAGAAGGAGAGCACCCTGCACCTGGT 74187 >seq2 Length=2502268 Score = 136 bits (150), Expect = 1e-26 Identities = 138/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||||||||| || || || || || || |||||||| ||||| || ||| ||||| || Sbjct 2443842 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 2443901 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || ||||| ||||| |||||||| || || ||||| ||||| ||||| ||| | Sbjct 2443902 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGATT 2443961 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||||||||| || |||||||| ||||| | || || |||| || ||| |||| || Sbjct 2443962 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTGTCCGACTACAACATCCAGAA 2444021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730521396536