Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Sup5_20PDA- 1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq332 140 4e-28 seq79 114 1e-20 >seq332 Length=1201059 Score = 140 bits (154), Expect = 4e-28 Identities = 155/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||| ||||||||||| || || ||||| || ||| || || |||| || |||||| Sbjct 625308 TGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCCTCCAGCTGC 625249 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 |||||||| || ||||| |||||||| || | || | || |||||||||| ||| || Sbjct 625248 TTACCAGCAAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTC 625189 Query 43101 TGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 |||| ||| | | | ||||||||||||||||| || | |||||| || ||||| || Sbjct 625188 GACTTGA-CGTTGTCGATGGTGTCGCTCGATTCCACCTCCAGCGTGATTGTCTTGCCAGT 625130 Query 43160 TAGCGTCTTTACAAAGATTTGCAT 43183 | ||||| || ||||||||||| Sbjct 625129 CAAAGTCTTGACGAAGATTTGCAT 625106 Score = 125 bits (138), Expect = 8e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| ||||| ||||| || |||||| || || ||||| || || || || || Sbjct 625092 CGCAGCACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTTCGGCCG 625033 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||| || || || |||||||||||||| || | || | | |||||| Sbjct 625032 TCCTCAAGCTGCTTGCCGGCAAAGATGAGTCGCTGCTGATCCGGGGGGATACCCTCCTTA 624973 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| ||| | | | || |||||||||||||| |||| |||||| Sbjct 624972 TCCTGGATCTTCGACTTGA-CGTTGTCGATGGTATCGCTCGATTCCACCTCGAGCGTGAT 624914 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||||||| || ||||| || ||||| ||||| Sbjct 624913 CGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 624878 >seq79 Length=585314 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| ||||| |||| ||||||||||| || || ||||| || ||| || || | Sbjct 160338 CGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 160397 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||| || ||||| || || ||||||||||||| || | || ||||||| Sbjct 160398 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTG 160457 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || |||| | | | |||||| || ||||| || | ||||| Sbjct 160458 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATC 160517 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 || || ||||| || ||||| || || || ||||| || Sbjct 160518 GTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 160555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571814283457920