Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Sup5_20PDA- 1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq332 114 3e-20 seq427 100 6e-16 seq353 100 6e-16 >seq332 Length=1201059 Score = 114 bits (126), Expect = 3e-20 Identities = 261/387 (67%), Gaps = 18/387 (5%) Strand=Plus/Plus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| | || |||||||| || ||||||||||| ||||||||||| || || | Sbjct 28501 TGCTCTTCTATGGCCCTCCCGGTACTGGCAAGACGTCCACCATCCTGGCTCTCGCGAAAG 28560 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 || | ||| || | || | | || ||||||||||| || || || ||||| | Sbjct 28561 AGCTCTACGGCCCGGAAATGATCAAATCCCGGGTGCTCGAGCTCAATGCGTCCGACGAGC 28620 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAAGA-CTTT-CTC-CAAGA---TGTCGATTT 254184 | || | | ||||||| || ||| |||||| |||| | | || | || | | Sbjct 28621 GTGGCATCTCCATCGTCCGAGAAAAGGTCAAGAACTTTGCGCGCATGCAATTGACCAACC 28680 Query 254185 CGTCGT-----TCCAAC--CCGG-----CTGTCCGCCTTTCAAGCTCGTGATCCTGGACG 254232 ||||| ||||| | | ||| ||||| |||||| || | ||||| |||| Sbjct 28681 CGTCGCCATCCTCCAAGAACAAGTATCCCTGCCCGCCATTCAAGATCATCATCCTCGACG 28740 Query 254233 AGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACT 254292 | || ||| |||||||| || || ||| || || ||||| || ||||| || || Sbjct 28741 AAGCCGACTCCATGACGCAGGATGCCCAGAGTGCTCTGCGCCGCACCATGGAAACATACA 28800 Query 254293 CCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCTGG 254352 | | ||||| || ||| || | |||||||||||| | ||||||| |||||| | Sbjct 28801 GCAAGATCACGCGCTTCTGCTTGATCTGCAACTACGTGACTCGCATCATCGACCCGCTTG 28860 Query 254353 CTTCTCGGTGCGCCAAGTTTCGATTCA 254379 | |||||| |||||| || |||| Sbjct 28861 CCAGTCGGTGTAGCAAGTTCCGCTTCA 28887 >seq427 Length=179256 Score = 100 bits (110), Expect = 6e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 254000 CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC 254059 |||||| ||| |||| || |||| || || || || ||||||||||| || |||| || Sbjct 50391 CCTTCCCCATCTGCTCCTCTACGGGCCGCCGGGTACGGGCAAGACGTCCACGGTCCTCGC 50332 Query 254060 GCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119 ||||||||| | | | |||| |||||| | || ||||||||||| ||||| Sbjct 50331 GCTGGCCCGCCGCATCTACGGCGCCTCCAACATGCGGCAGATGGTGCTCGAGCTCAACGC 50272 Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167 || ||||| || || | ||||| || ||||| |||||||||| || Sbjct 50271 ATCCGACGACCGAGGCATCGACGTGGTGCGCGAGCAGATCAAGACGTT 50224 >seq353 Length=291805 Score = 100 bits (110), Expect = 6e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 254000 CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC 254059 |||||| ||| |||| || |||| || || || || ||||||||||| || |||| || Sbjct 98889 CCTTCCCCATCTGCTCCTCTACGGGCCGCCGGGTACGGGCAAGACGTCCACGGTCCTCGC 98830 Query 254060 GCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119 ||||||||| | | | |||| |||||| | || ||||||||||| ||||| Sbjct 98829 GCTGGCCCGCCGCATCTACGGCGCCTCCAACATGCGGCAGATGGTGCTCGAGCTCAACGC 98770 Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167 || ||||| || || | ||||| || ||||| |||||||||| || Sbjct 98769 ATCCGACGACCGAGGCATCGACGTGGTGCGCGAGCAGATCAAGACGTT 98722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073760016458752