Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Sup5_20PDA- 1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq211 149 8e-31 seq333 91.5 2e-13 >seq211 Length=399506 Score = 149 bits (164), Expect = 8e-31 Identities = 451/696 (65%), Gaps = 8/696 (1%) Strand=Plus/Plus Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071 ||||| ||||| | || ||||| | | ||| || || | | || || || ||||| Sbjct 29356 CCAGGGCATTCGTTGGGGCACATGAGGGTCCAGTCGCCATTCTTCTCGACACGCTTCATG 29415 Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131 |||||||| || ||||| ||||| | || | || | | | | ||||| || || Sbjct 29416 AAGAGATCGGGGATCCACAGAGCAAGGAACAGGTCACGAGCACGAGCCTCCTCCTTGCCG 29475 Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191 ||||| |||||||||||| | | | |||| |||||||| |||| ||| ||| Sbjct 29476 TGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCAGCGTGCCACGGCTCCAGGTAGATG 29535 Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251 || | | | || || || ||||| || ||||| || | |||||| || ||||| || | Sbjct 29536 GCGAAAGCGCCGGGTCGCTTGTTGCCGCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAC 29595 Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311 || | | ||| || | | ||| ||||| || || ||||| |||| || ||| |||| Sbjct 29596 ACCCGAAGCATGGGGGTGACACCGTTGGAAGTGCCGTTGGTGCCGGCAATGTAGGATCCA 29655 Query 66312 CTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 66371 | ||||| ||| || || || || || || ||||| || ||||| | || Sbjct 29656 GTGGCACGGATACGGTGAACGTTCAGGCCGATGCCACCAGCCATCTTGGAGATCATGGCA 29715 Query 66372 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 66431 || || | || || ||||| |||||||| || || ||| |||| | | || || Sbjct 29716 CAAGTCTTGAGGGTGTCGTAGATACCCTCTATGCTGTCCTCCTTCATATCGACAAGGAAG 29775 Query 66432 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 66491 || |||| ||| | || |||||||| || | || || || ||||| || Sbjct 29776 CAAGAGGACAGCTGGGCCTGGGGCGTGCCCGCATTGAACAGCGTGGGCGAGGCGTGGGTG 29835 Query 66492 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC----CCATTG 66547 || | || || | || |||||||||||||| | || || || || | Sbjct 29836 AAGAACTTGCTGGACATGAGGTTGTACGTCTCAATGACACGCTCAATGTCGTCTCCCCAG 29895 Query 66548 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 66607 ||| || || ||||||||||| | |||||| || || | ||||| ||| | ||| Sbjct 29896 ATG----CCGACGGCGACACGCATAATCATGTGTTGCGGGCGCTCAACAATCCTACCGTT 29951 Query 66608 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 66667 | || | | ||| || |||| ||| || || || || || | || ||||| Sbjct 29952 GAGCTTGAGAAGGTACGAGCGCTCCAGAGTCTTGAAGCCGAAGTACTGATAGTTGAAGTC 30011 Query 66668 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 66703 || || || | ||| | |||| ||| | |||||| Sbjct 30012 GCGGTCATAGACAATGGCGGAGTCGAGCTCATCCTT 30047 >seq333 Length=313450 Score = 91.5 bits (100), Expect = 2e-13 Identities = 147/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || || || ||| ||| ||||||||||||| || | ||||| || || || || Sbjct 166369 CAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGCGAGATGAGCTCGTTCGAGAAGGTCAGG 166428 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 |||||||| ||||||||||| || |||||||| ||||| ||||| | || ||||| Sbjct 166429 CCGGGCATGAGGCCACGCTTCTTGAGCCAAAAAATGGAAGCAAAGGCACCGCTGAAGAAG 166488 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA--AC-CGGCACTGTCATGT 36334 || || || || || || ||||||| || | || || | || | | |||| || Sbjct 166489 ATGCCCTCGACGGCGGCGAAGGCAACCAGGCGCTGAGCAAAGGACGAGTCCTTGTCCTGG 166548 Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTT 36363 |||||| ||||| ||||||||||| Sbjct 166549 ATCCACCGGATGGCCCAGTCGGCCTTCTT 166577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658168982597760