Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Sup5_20PDA- 1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq211 165 1e-35 seq333 91.5 2e-13 >seq211 Length=399506 Score = 165 bits (182), Expect = 1e-35 Identities = 392/592 (66%), Gaps = 8/592 (1%) Strand=Plus/Plus Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033 ||||| ||||| || || ||||| | | ||| || |||| | | || || ||||| Sbjct 29356 CCAGGGCATTCGTTGGGGCACATGAGGGTCCAGTCGCCATTCTTCTCGACACGCTTCATG 29415 Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093 |||||||| || ||||| ||||| | || || || | | | | |||||| || || Sbjct 29416 AAGAGATCGGGGATCCACAGAGCAAGGAACAGGTCACGAGCACGAGCCTCCTCCTTGCCG 29475 Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153 ||||| |||||||||||| | | | ||||| |||||||| |||| ||| ||| Sbjct 29476 TGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCAGCGTGCCACGGCTCCAGGTAGATG 29535 Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213 || | | | || || || ||||| || ||||| || | |||||| || ||||| || | Sbjct 29536 GCGAAAGCGCCGGGTCGCTTGTTGCCGCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAC 29595 Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273 || | | ||| || | | ||| ||||| | || ||||| |||| || ||| |||| Sbjct 29596 ACCCGAAGCATGGGGGTGACACCGTTGGAAGTGCCGTTGGTGCCGGCAATGTAGGATCCA 29655 Query 72274 CTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 72333 ||||||| ||| | || || || || || || ||||| || ||||| | || Sbjct 29656 GTGGCACGGATACGGTGAACGTTCAGGCCGATGCCACCAGCCATCTTGGAGATCATGGCA 29715 Query 72334 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 72393 || || | || || ||||| |||||||| || || ||| |||| | | || || Sbjct 29716 CAAGTCTTGAGGGTGTCGTAGATACCCTCTATGCTGTCCTCCTTCATATCGACAAGGAAG 29775 Query 72394 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 72453 || |||| ||| | || |||||||| || | || || || ||||| || Sbjct 29776 CAAGAGGACAGCTGGGCCTGGGGCGTGCCCGCATTGAACAGCGTGGGCGAGGCGTGGGTG 29835 Query 72454 AACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC----CCATTG 72509 || | || |||| || |||||||||||||| | || || || || | Sbjct 29836 AAGAACTTGCTGGACATGAGGTTGTACGTCTCAATGACACGCTCAATGTCGTCTCCCCAG 29895 Query 72510 ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATC 72561 ||| || || ||||||||||| | ||| || || || | ||||| ||| Sbjct 29896 ATG----CCGACGGCGACACGCATAATCATGTGTTGCGGGCGCTCAACAATC 29943 >seq333 Length=313450 Score = 91.5 bits (100), Expect = 2e-13 Identities = 147/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || || || ||| |||||||||||| |||| || | ||||| || || || || Sbjct 166369 CAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGCGAGATGAGCTCGTTCGAGAAGGTCAGG 166428 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 |||||||| ||||||||||| || |||||||| || || ||||| | || |||||| Sbjct 166429 CCGGGCATGAGGCCACGCTTCTTGAGCCAAAAAATGGAAGCAAAGGCACCGCTGAAGAAG 166488 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA--AC-CGGCACTGTCATGT 42241 || || || || || || ||||||| || | || || | || | | |||| || Sbjct 166489 ATGCCCTCGACGGCGGCGAAGGCAACCAGGCGCTGAGCAAAGGACGAGTCCTTGTCCTGG 166548 Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTT 42270 |||||| ||||| ||||||||||| Sbjct 166549 ATCCACCGGATGGCCCAGTCGGCCTTCTT 166577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671135307392640