Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Sup5_20PDA- 1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq79 89.7 4e-13 seq332 86.0 5e-12 >seq79 Length=585314 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 || || ||||||||||| || |||||||| || || | || || | ||||| ||||| Sbjct 160350 TGCAGGGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGGGTGCGGCCATCCTCGAGCTG 160408 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| || | || | |||||||| || || | | ||||||||| || || Sbjct 160409 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 160468 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||||| | | ||||| |||| ||||||| ||| | || || || || || || Sbjct 160469 GGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGT 160528 Query 48703 GAGAGTTTTCACAAAAATCTGCATCGTGTCT 48733 ||| || || || |||||||||||| || || Sbjct 160529 GAGGGTCTTGACGAAAATCTGCATCTTGCCT 160559 >seq332 Length=1201059 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| |||||||||||||| | || || | ||||| |||||||| ||| || | Sbjct 624841 CTCCTTCTGAATGTTGTAATCGGACAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAA 624782 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | |||||||||||| || | | ||||||||| ||| || ||| | | Sbjct 624781 GATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTCACATT 624722 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | ||||| |||| |||||| ||||| || ||||| || |||||||| || || || Sbjct 624721 GTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 624662 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| ||||||| | | ||| | ||| || || |||||| || |||||||| || || Sbjct 625105 ACCACCGCGCAGGCGCAGCACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTC-GC 625047 Query 48559 CAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617 | || || ||||||| |||||||| ||| | | || | |||||||||||| | Sbjct 625046 TGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGTCGCTGCTGATCCGGGG 624987 Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTC 48675 | | || ||||| ||| || ||| ||||| | | || ||||||||| | || || Sbjct 624986 GGATACCCTCCTTATCCTGGATCTTCGACTTGACGTTGTCG--ATGGTATCGCTCGATTC 624929 Query 48676 CGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | ||||| || || || || || || || || || || || |||||||| Sbjct 624928 CACCTCGAGCGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 624878 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 || || ||||||||||| || |||||||| || || | || || ||||||||||||| Sbjct 625308 TGCAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGGGTGCGACCGTCCTCCAGCTG 625250 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| | | || | ||||||||||||| || | | ||||||||| || || Sbjct 625249 CTTACCAGCAAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 625190 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 | ||||| | | || ||||| ||| | || ||| ||| | || || || || || Sbjct 625189 CGACTTGACGTTGTCG--ATGGTGTCGCTCGATTCCACCTCCAGCGTGATTGTCTTGCCA 625132 Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726 || | ||| || || || || ||||| Sbjct 625131 GTCAAAGTCTTGACGAAGATTTGCAT 625106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421248817824464