Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Sup5_20PDA- 1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq211 163 4e-35 seq333 91.5 2e-13 >seq211 Length=399506 Score = 163 bits (180), Expect = 4e-35 Identities = 457/701 (65%), Gaps = 8/701 (1%) Strand=Plus/Plus Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077 |||| ||||| ||||| | || ||||| | | ||| || || | | || || || | Sbjct 29351 CCAGGCCAGGGCATTCGTTGGGGCACATGAGGGTCCAGTCGCCATTCTTCTCGACACGCT 29410 Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63137 |||| |||||||| || ||||| ||||| | || || || | | | | ||||| | Sbjct 29411 TCATGAAGAGATCGGGGATCCACAGAGCAAGGAACAGGTCACGAGCACGAGCCTCCTCCT 29470 Query 63138 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63197 | || ||||| |||||||||||| | | | ||||| |||||||| |||| || Sbjct 29471 TGCCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCAGCGTGCCACGGCTCCAGGT 29530 Query 63198 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63257 | ||||| | | | || || || ||||| || ||||| || | |||||| || ||||| | Sbjct 29531 AGATGGCGAAAGCGCCGGGTCGCTTGTTGCCGCCCTGGTCGACGTATCTGGCAGTGTTGT 29590 Query 63258 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGC 63317 | | || | | ||| || | | ||| ||||| || || ||||| || | || ||| Sbjct 29591 TGAACACCCGAAGCATGGGGGTGACACCGTTGGAAGTGCCGTTGGTGCCGGCAATGTAGG 29650 Query 63318 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 |||| ||||||| ||| || || || || || || ||||| || ||||| | Sbjct 29651 ATCCAGTGGCACGGATACGGTGAACGTTCAGGCCGATGCCACCAGCCATCTTGGAGATCA 29710 Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 || || || | || || ||||| |||||||| || || ||| |||| | | | Sbjct 29711 TGGCACAAGTCTTGAGGGTGTCGTAGATACCCTCTATGCTGTCCTCCTTCATATCGACAA 29770 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 | || || |||| ||| | || |||||||| || | || || || |||| Sbjct 29771 GGAAGCAAGAGGACAGCTGGGCCTGGGGCGTGCCCGCATTGAACAGCGTGGGCGAGGCGT 29830 Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC----C 63553 | || || | || || | || |||||||||||||| | || || || | Sbjct 29831 GGGTGAAGAACTTGCTGGACATGAGGTTGTACGTCTCAATGACACGCTCAATGTCGTCTC 29890 Query 63554 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 63613 | |||| || || ||||||||||| | |||||| || || | ||||| ||| | Sbjct 29891 CCCAGATG----CCGACGGCGACACGCATAATCATGTGTTGCGGGCGCTCAACAATCCTA 29946 Query 63614 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAA 63673 ||| | || | | ||| || |||| ||| || || || || || | || Sbjct 29947 CCGTTGAGCTTGAGAAGGTACGAGCGCTCCAGAGTCTTGAAGCCGAAGTACTGATAGTTG 30006 Query 63674 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714 ||||| || || || | ||| | |||| ||| | |||||| Sbjct 30007 AAGTCGCGGTCATAGACAATGGCGGAGTCGAGCTCATCCTT 30047 >seq333 Length=313450 Score = 91.5 bits (100), Expect = 2e-13 Identities = 147/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || || || ||| ||| ||||||||||||| || | ||||| || || || || Sbjct 166369 CAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGCGAGATGAGCTCGTTCGAGAAGGTCAGG 166428 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| ||||||||||| || |||||||| ||||| ||||| | || ||||| Sbjct 166429 CCGGGCATGAGGCCACGCTTCTTGAGCCAAAAAATGGAAGCAAAGGCACCGCTGAAGAAG 166488 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA--AC-CGGCGCTGTCATGT 32837 || || || || || || ||||||| || | || || | || | | |||| || Sbjct 166489 ATGCCCTCGACGGCGGCGAAGGCAACCAGGCGCTGAGCAAAGGACGAGTCCTTGTCCTGG 166548 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTT 32866 |||||| ||||| ||||||||||| Sbjct 166549 ATCCACCGGATGGCCCAGTCGGCCTTCTT 166577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633628324934400