Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Sup5_20PDA- 1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq332 123 2e-23 seq79 116 3e-21 seq221 91.5 1e-13 >seq332 Length=1201059 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || ||| |||| || || |||||| | | | Sbjct 624878 ATGCAGATCTTCGTCAAGACCCTGACGGGCAAGACGATCACGCTCGAGGTGGAATCGAGC 624937 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || || || || ||||||||||| || || ||||| Sbjct 624938 GATACCATCGACAACGTCAAGTCGAAGATCCAGGATAAGGAGGGTATCCCCCCGGATCAG 624997 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||||||||| ||| | ||||| ||| ||| || ||| |||||| Sbjct 624998 CAGCGACTCATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGAACCCTCAGCGACTACAAC 625057 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || ||| | ||| | || |||| ||||||| ||| Sbjct 625058 ATCCAGAAGGAGTCTACCCTGCATCTGGTGCTGCGCCTGCGCGGTGGT 625105 Score = 118 bits (130), Expect = 9e-22 Identities = 130/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || ||||| || |||| ||| | ||| || | || Sbjct 624674 ACCGGCAAGACCATCACCCTCGAGGTGGAGTCCTCCGACACCATCGACAATGTGAAGTCC 624733 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| ||||| || ||||| || || || || || ||||| || Sbjct 624734 AAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAGCAGCGCCTGATCTTCGCCGGAAAG 624793 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| ||||||| | ||||||||||||||||| || || || || Sbjct 624794 CAGCTCGAGGATGGCCGCACCCTGTCCGATTACAACATTCAGAAGGAGTCGAC 624846 Score = 111 bits (122), Expect = 1e-19 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 22258 ACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAG 22317 |||||||| || || || |||| || | ||| || | || || ||||| |||||| Sbjct 624394 ACTCTTGAGGTCGAGTCCTCCGACACTATCGACAATGTGAAGTCCAAGATTCAGGACAAG 624453 Query 22318 GAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCAC 22377 ||||| ||||| || ||||| || || || || || ||||| || ||| | |||||| | Sbjct 624454 GAGGGCATTCCCCCGGATCAGCAGCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGC 624513 Query 22378 CGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 |||||| ||||||| |||||||| || || || |||||| Sbjct 624514 CGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACC 624552 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||||| || || || || |||| || || |||||| | | | Sbjct 625106 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAGACAATCACGCTGGAGGTGGAATCGAGC 625165 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| ||||| || ||||| Sbjct 625166 GACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAG 625225 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| || || ||| | ||||| |||||| | ||| |||||| Sbjct 625226 CAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGCACCCTGAGCGACTACAAC 625285 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 625286 ATCCAGAAGGA 625296 >seq79 Length=585314 Score = 116 bits (128), Expect = 3e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || || || | || || || ||| |||| ||||| ||||| | Sbjct 160555 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 160496 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| ||| | ||| || |||| || || || ||||||||||| || || ||||| Sbjct 160495 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 160436 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || || || || || |||||||| ||| | |||||| ||||||| | ||| ||| Sbjct 160435 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 160376 Query 22396 AACATTCAAAAAGA 22409 ||||| || || || Sbjct 160375 AACATCCAGAAGGA 160362 >seq221 Length=1337442 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || || || || |||| ||||| || || || | || || | Sbjct 132297 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 132356 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| || || || ||||||||||| ||||| || ||||| || || | Sbjct 132357 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAGCGATT 132416 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || |||||||| ||| | |||||| ||| ||| | ||||| |||||||| || || Sbjct 132417 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTGTCCGACTACAACATCCAGAA 132476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419725626438160