Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Sup5_20PDA- 1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq189 143 5e-29 seq333 113 9e-20 seq1 104 5e-17 >seq189 Length=424775 Score = 143 bits (158), Expect = 5e-29 Identities = 445/678 (66%), Gaps = 23/678 (3%) Strand=Plus/Plus Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 || || |||||||| |||||||||||||||||||| ||||| |||||||||| || | Sbjct 286674 GTCGGCTCTCTGTCCGGTGGTTGGAAGATGAAGCTTGCCCTGGCTCGCGCCATGCTGCAA 286733 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815 |||||||| || || || || || || |||||||| | ||| ||||||| | || Sbjct 286734 AAGGCCGATGTTCTCCTTCTGGACGAACCGACCAACCATCTCGACGTCACCAACATTGCT 286793 Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGA---ATGTTTCTTCCCTCATTGTCTCTCAC 279872 ||||| | | |||||| | |||| | | | | || || ||||| ||||| ||| Sbjct 286794 TGGCTGGAGAACTACCT--CAAGTC-GCACACCGAGATTACTAGTCTCATCGTCTCCCAC 286850 Query 279873 GACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATT---CACTATGAGCAAAATCTG 279929 |||||||||||||| || ||| | | || |||| ||||| |||| || | Sbjct 286851 GACTCTGGCTTCCTGGACAACGT---CACGACCGACATTTACCACTACGAGCCCAACAAG 286907 Query 279930 AAGCTCTCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCC 279989 ||||| | ||| ||||||||| | || ||||| | | || || ||||| Sbjct 286908 AAGCTGGCGTGCTACAAGGGCAACCTGGCCGCCTTCGTCGAGATCCGACCCGAGGCCAAG 286967 Query 279990 GCCTACTATGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTG 280049 |||||| ||| || ||| || | ||| | |||||| || || | || Sbjct 286968 AGCTACTACACCCTCTCGGCGTCCAACGTCCAGTTCAAGTTCCCTCCTCCTGGCATCTTG 287027 Query 280050 GAGGGCATCACATCAAAGGATCGCGCAATCAT--GAAGCTCCGTGGCGTCTCCTTTGCTT 280107 ||| ||| || || || || || || ||| | | |||||| | || | Sbjct 287028 ACCGGCGTCAAGTCTCAGACCCGAGCCATTATCCGAA--TGAGCAACGTCTCGTACGCGT 287085 Query 280108 ATCCCAATGGCCCCAA--CATCT-TCA--GCAGTGTCAACTCGCAGGTTTCTATGAACTC 280162 | ||||| | || || | ||| ||| | || || || ||| | | || || Sbjct 287086 ACCCCAACGCGCCGAAGCCGTCTCTCATGGACGTTTC--CTGCCAGCTCACCCTGTCGTC 287143 Query 280163 ACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGAC 280222 || | | |||| |||||||| |||||||| ||||| || || ||||| | || || Sbjct 287144 GCGTGTCGCCATCATCGGACCCAACGGTGCGGGCAAGTCGACGCTCATCAAGCTTCTTAC 287203 Query 280223 TGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTA 280282 ||||||||| | || || || |||||| || ||| |||| || | || Sbjct 287204 CGGCGAGACCATTCCTTCTTCCGGAAAGGTCGAGAAGCACCCTAACCTGCGTATCGGCTA 287263 Query 280283 CGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATA 280342 | || |||||||| | | ||| |||||| |||||||| | ||| || ||||| || Sbjct 287264 CATCAAGCAGCACGCGCTGGAGCACGTCGAGATGCACCTGGAGAAGACCCCCAACCAGTA 287323 Query 280343 CATTCAGTGGCGCTATGC 280360 | | ||||||||||| || Sbjct 287324 CCTGCAGTGGCGCTACGC 287341 >seq333 Length=313450 Score = 113 bits (124), Expect = 9e-20 Identities = 292/443 (66%), Gaps = 8/443 (2%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 || ||||| || | |||||| |||| ||||| ||||||||||||||||||||| | Sbjct 166102 TCAAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGAC 166161 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | |||||| ||| || ||| || || |||| | |||||| || || ||||| | Sbjct 166162 GACTTGTACACCTTCTCATTGCCGAGGGCCACGAGCAGGCGGTCGGCGACGAACTCGATG 166221 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||||| | | ||||||||| | || || || | |||||| | | Sbjct 166222 TACTGCTTCATCAAATTGGCGTTCATGCCGAGCAGCGCGCAGGGCAGGGCCTCAGTCAAG 166281 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACC-TGTGCCAGAGA 251798 || |||| || ||| || || ||| | || ||| | ||| | | | | | Sbjct 166282 AACTCCTGCTCAATGGTGACAGCGTCCGTGATGATGTCCTCGATGACCTTTTTGCTGGCA 166341 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858 | || || || | |||| |||||| | |||| | ||||||||||||||| Sbjct 166342 C----GGTGCTTCATGTGGGAGTGCAGGAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTC 166397 Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918 || ||||| |||||| || | |||||| ||||| | ||||| ||| ||||||| Sbjct 166398 TCGCGAGATGAGCTCGTTCGAGAAGGTCAGGCCGGGCATGAGGCCACGCTTCTTGAGCCA 166457 Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAG 251978 || || | ||||| || ||| | | |||||||| | | ||||| || Sbjct 166458 AAAAATGGAAGCAAAGGCACCGCTGAAGAAGATGCCCTCGACGGCGGCGAAGGCAACCAG 166517 Query 251979 GCGCTCAGCAAACGACTTGTCCT 252001 ||||| |||||| ||| ||||| Sbjct 166518 GCGCTGAGCAAAGGACGAGTCCT 166540 >seq1 Length=1584712 Score = 104 bits (114), Expect = 5e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || |||| |||||||| ||||| ||||| || ||||| ||||| ||||| ||| | Sbjct 119495 CTCTCGTATTGCCGTCATTGGCCCCAACGGTGCTGGCAAGTCGACCCTGATCAACGTCTT 119554 Query 280220 GACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279 ||| || ||| | ||||| ||| | | |||| ||||| || || || Sbjct 119555 GACCGGTGAGCTCATCCCCACTCTGGGTGAGATCTACCAGCACGAGAACATCCGTATCGC 119614 Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339 ||| || |||||||| || ||||||||| ||||||||||||| |||||| | | Sbjct 119615 CTACATCAAGCAGCACGCCTTTGCCCACATCGACAACCACCTGGACAGCACTCCTTCCGA 119674 Query 280340 ATACATTCAGTGGCG 280354 ||||| |||||||| Sbjct 119675 GTACATCCAGTGGCG 119689 Score = 102 bits (112), Expect = 2e-16 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || |||||||| || |||| ||||| ||||| || |||| |||||||| || ||| Sbjct 118680 GGCGAGGATCTCTGCAACTGCACCTTCTCCCTCGCCTACGGTGCCAAGATTCTCCTCAAC 118739 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | ||| | ||||||||||| | || || ||||| ||| ||||| || | Sbjct 118740 CAGACTCACCTGCGCCTCAAGCGTGGCCAGCGCTACGGTCTTTGCGGCCCCAACGGCTCC 118799 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| |||||| ||||||||||| |||| ||| | | ||| ||||| | ||| Sbjct 118800 GGCAAGTCCACTCTGATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 118858 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566 ||||| | ||| || | || ||||||||| |||||||| Sbjct 118859 GAGCGAGGTCAAGACTGTCTTCGTCGAGCACGACCTCGACTCC 118901 Score = 89.7 bits (98), Expect = 1e-12 Identities = 122/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | || |||||| ||||| | ||||||| ||||| || ||||| || || | Sbjct 120055 CCAACTTTGGCCTGGACGCCGAGCTGGTTTCTCACTCGCGCATGCGTGGTCTGTCCGGTG 120114 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790 ||||| ||||| |||| | | || |||| |||||| | ||| || | ||||| Sbjct 120115 GCCAGCGTGTCAAGACTGTCCTGGCTGCTTGCTC-GTGGCAGCGCCCCCATCTTATCGTC 120173 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838 ||||||||||| |||||||| || ||||| || |||||| || ||| Sbjct 120174 CTCGACGAGCCCACCAACTACCTCGACCGTGACTCCCTGGGTGCCCTG 120221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027830689510224