Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Sup5_20PDA- 1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq333 168 7e-37 seq332 116 4e-21 seq79 107 2e-18 >seq333 Length=313450 Score = 168 bits (186), Expect = 7e-37 Identities = 352/522 (67%), Gaps = 23/522 (4%) Strand=Plus/Minus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCC 52385 || || ||| ||||||| ||||| | ||||| || ||||||| || |||| | | Sbjct 166592 GTCCCTTGCATTCGCAAGAAGGCCGACTGGGCCATCCGGTGGATCCAG---GACAAGGAC 166536 Query 52386 ACGC---TGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 || | || ||||| |||| ||||||||| ||||||||| | || || ||| Sbjct 166535 TCGTCCTTTGCTCAGCGCCTGGTTGCCTTCGCCGCCGTCGAGGGCATCTTCTTCAGCGGT 166476 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 |||||| |||| |||| | || | | ||| | |||||||||||||| ||| Sbjct 166475 GCCTTTGCTTCCATTTTTTGGCTCAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCG 166416 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT------CTAC 52556 |||||| | || ||||| ||||| || |||||||| |||||||| ||||| || | Sbjct 166415 AACGAGCTCATCTCGCGAGACGAGGGTCTGCACACCGACTTTGCCTGCCTCCTGCACTCC 166356 Query 52557 TACAAGACGC-GCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGA 52615 ||| || || |||| | | |||| | || ||| | ||| ||| ||| Sbjct 166355 CACATGAAGCACCGTGCCAGCAAAAAGG---TC-------ATCGAGGACATCATCACGGA 166306 Query 52616 GGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCAT 52675 || || | || || ||||||| || || | || ||||| || |||||| ||||| Sbjct 166305 CGCTGTCACCATTGAGCAGGAGTTCTTGACTGAGGCCCTGCCCTGCGCGCTGCTCGGCAT 166246 Query 52676 GAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCT 52735 |||||| | | ||| ||||||||||||| || || || || ||| | ||| || Sbjct 166245 GAACGCCAATTTGATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTGGCCCT 166186 Query 52736 CGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCT 52795 ||| | ||| | ||| | ||| || || || || ||| | ||||| || || Sbjct 166185 CGGCAATGAGAAGGTGTACAAGTCGTCCAACCCCTTCGACTTCATGGAGAACATCTCCCT 166126 Query 52796 TGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 | |||||||||||||| || |||||||| ||||| || || Sbjct 166125 GGGCGGCAAGACCAACTTCTTTGAGAAGCGTGTCGGTGACTA 166084 >seq332 Length=1201059 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||| || | ||| | | | |||||||| || |||||||||||||| Sbjct 625104 CCACCGCGCAGGCGCAGCACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTG 625045 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||| || || || |||| | |||| || ||||| || ||||| || Sbjct 625044 AGGGTTCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGTCGCTGCTGATCCGGGGGG 624985 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| || || || ||| || || | | || | ||| ||| |||| |||||| Sbjct 624984 ATACCCTCCTTATCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTCGATTCCACC 624925 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| ||| | ||| || || ||||| || || || || |||||||| Sbjct 624924 TCGAGCGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 624878 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| || || |||||| || || ||||| | | | Sbjct 625297 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCCTCCAGCTGCTTACCAGCAAA 625238 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| |||||||| || ||||| || || || || ||||| ||| || || | | Sbjct 625237 GATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTT 625178 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| |||| |||||||| | ||| | || || ||||||| ||| || || Sbjct 625177 GTCGATGGTGTCGCTCGATTCCACCTCCAGCGTGATTGTCTTGCCAGTCAAAGTCTTGAC 625118 Query 138603 AAAAATCTGCAT 138614 || || ||||| Sbjct 625117 GAAGATTTGCAT 625106 Score = 84.2 bits (92), Expect = 2e-11 Identities = 131/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||| ||| || || || |||||||| || || |||| Sbjct 624843 GACTCCTTCTGAATGTTGTAATCGGACAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCG 624784 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 |||| || ||||| || ||||| || || || || ||||| ||| | || | || Sbjct 624783 AAGATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTC-CTGAATCTTGGACTTCAC 624725 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | |||||||| ||||||||||||| || | || || || || || || | Sbjct 624724 ATTG-TCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCT 624666 Query 138599 TTAC 138602 | || Sbjct 624665 TGAC 624662 >seq79 Length=585314 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| || || |||||||| || || |||| | Sbjct 160361 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 160420 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| || ||||| ||||| || || || || || ||||| ||| || || | ||| Sbjct 160421 GATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 160480 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | |||||||| ||||||||||| | || | ||| || || || || || || | Sbjct 160481 G-TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 160539 Query 138602 CAAAAATCTGCAT 138614 | ||||||||||| Sbjct 160540 CGAAAATCTGCAT 160552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259521678080