Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tolypocladium_20sp._20Sup5_20PDA-
1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq410 105 5e-18
>seq410
Length=1178163
Score = 105 bits (116), Expect = 5e-18
Identities = 273/407 (67%), Gaps = 22/407 (5%)
Strand=Plus/Minus
Query 29988 CACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30044
|||||| ||||| | ||||| ||||| || || || |||||| || ||| ||
Sbjct 1092556 CACGTAGAACTGGGCAAACATG---TGGCAAGGCGGCAGGGCCATGCTCTTCAGGTCCTT 1092500
Query 30045 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTC 30101
||||||||||| ||| ||| || || | ||| | || || ||| | || |
Sbjct 1092499 TGGGTTCCAGGCAGACATGATTATACGGCGGTCGTACGGCTTCGTCCGCAGCTTGTGTAT 1092440
Query 30102 CACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGT 30160
|||| || || ||||| || || ||| |||| |||||||| | | ||| ||
Sbjct 1092439 CACGTCG----GCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGTCTTTGCATCCACGT 1092384
Query 30161 ACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCC 30220
|||| || || || |||| ||||||||||||||| || || |||| || || | || |
Sbjct 1092383 ACTCGGCGCCAAAGTGCCGCCACTGGAACCCGTAGACGGGCCCCAAATCGCCGACCTCGC 1092324
Query 30221 TGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA 30280
|||| | ||| |||| | | || | || |||||| | ||||||||||| |
Sbjct 1092323 GGTGCGACAGGCCGACGCTGTCGAGGTACTCGCGCGACCCGTTGCCATCCCAGATCTTGA 1092264
Query 30281 CCC---CCT-TCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGC 30336
| | ||| ||| | | | | || || | ||| |||| || |||||||||||||
Sbjct 1092263 CGCCGGCCTCGCTCAGCGCGAGCGATGACGTGT-TGG--CCTC-GATGAACCACAGCAGC 1092208
Query 30337 TCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383
|| | |||||||| ||| ||||| | ||| || || ||||| ||
Sbjct 1092207 TCGGCGACGACGGCTTTCAGGAAGACGCGCTTCGTGGTCAGGAGTGG 1092161
Score = 100 bits (110), Expect = 2e-16
Identities = 135/181 (75%), Gaps = 8/181 (4%)
Strand=Plus/Plus
Query 52016 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGT- 52074
|||||||||| || || | ||| ||| | ||| |||| || ||||||||||||||
Sbjct 326809 CGTCAAGGTGCGGGTGCGAACCACCAAGATCCCCCAGATCGGAGACAAGTTTGCGTCTCG 326868
Query 52075 TCACGGCGCAAAAGGGGACGTGCGGAGC--CGTCCTGACCCAGGAGGACATGCCCTTCGA 52132
|||||| |||||||| || ||| | ||| | ||| | ||||||||||| || |
Sbjct 326869 TCACGGT-CAAAAGGGTACCATCGGCGTGACGTACCGAC--AAGAGGACATGCCGTT-TA 326924
Query 52133 CAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCATCCAGGATGA 52191
| || || || ||| ||||||| ||||||||||||||||||| |||| || | ||||
Sbjct 326925 CGAGAGAGGGCGTGACGCCCGACATCATCATCAACCCCCACGCTATTCCGTCGCGAATGA 326984
Query 52192 C 52192
|
Sbjct 326985 C 326985
Score = 87.8 bits (96), Expect = 1e-12
Identities = 129/180 (72%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 29791 AGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTG- 29849
||||| ||| || | || ||||| || || |||| ||| ||||| |||| | |||
Sbjct 1092834 AGCTGCTCCTTGAGTGCATCGACGTGGTCGAGATAGATGTGGGCGTCCCCCATGACGTGC 1092775
Query 29850 GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTA 29909
| || || || || | ||| || || || | | ||||| ||| || || | |||
Sbjct 1092774 GTCAGGCTG-CCGGGCACCAGCTCGCACACATGGGAAAGCATGTGCGTCAGCAGCGCGTA 1092716
Query 29910 GCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969
|||||| ||||| || || || ||||| |||||||| | ||||||||||| ||||||||
Sbjct 1092715 GCTGGCAATGTTGAACGGGACGCCGAGGCCCATGTCGCAGGACCTCTGGTACAGCTGACA 1092656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408615289267472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |