Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Sup5_20PDA- 1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq332 100 2e-16 seq79 95.1 9e-15 >seq332 Length=1201059 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || |||||||| || || || ||||| || || | ||| |||| |||| |||| Sbjct 625308 TGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCGTCCTCCAGCTGC 625249 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 ||||| ||||| || || ||||| ||||||| ||||| |||||||||||| ||||| Sbjct 625248 TTACCAGCAAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTC 625189 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | | || || |||||||||| ||| || || || || ||| Sbjct 625188 GACTTGACGTTGTCGATGGTGTCGCTCGATTCCACCTCCAGCGTGATTGTCTTGCCAGTC 625129 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || || || ||||| Sbjct 625128 AAAGTCTTGACGAAGATTTGCAT 625106 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || ||||| ||| || ||||| |||||||| || || | || | || || | |||| Sbjct 624852 TGGAGCGTCGACTCCTTCTGAATGTTGTAATCGGACAGGGTGCGGCCATCCTCGAGCTGC 624793 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 || ||||| || ||||| ||||| ||||||| ||||| |||||||||||| |||||| Sbjct 624792 TTTCCGGCGAAGATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGAATCTT 624734 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| ||| || || || ||||| || || || | || | || || | |||| Sbjct 624557 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGC 624498 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || ||||| || ||||| ||||| ||||||| ||||| |||||||||||| |||||| Sbjct 624497 TTTCCGGCGAAGATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGAATCTTG 624438 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || ||| | | || || || | ||| ||||| | ||||| || || ||||| Sbjct 624437 GACTTCACATTGTCGATAGTGTCGGAGGACTCGACCTCAAGAGTAATGGTCTTGCCCGT 624379 >seq79 Length=585314 Score = 95.1 bits (104), Expect = 9e-15 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||||| || || |||||||| || || || ||||| || || | || Sbjct 160335 AGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGG 160394 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| ||||| || ||||| ||||| || || | ||| | ||||||| Sbjct 160395 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCC 160454 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || | ||||||||| | || Sbjct 160455 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTG 160514 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 ||||| || ||||| | || || || |||||||||||| || Sbjct 160515 ATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 160556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935445797872