Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Sup5_20PDA- 1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq211 307 2e-78 seq333 140 6e-28 >seq211 Length=399506 Score = 307 bits (340), Expect = 2e-78 Identities = 856/1285 (67%), Gaps = 61/1285 (5%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476 ||||||||||||||||||||||||||||||||| || ||| | | | || |||||| Sbjct 28804 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTGGTTCAATTGCCGAGCTTCGGGA 28863 Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 || || ||||| ||||| | ||| | || ||||| ||||| || || | || Sbjct 28864 GACTCAAAAGGCATGCGCAGAGCAAGGAAGGCATCAGCCAGGCCCTGGACACCCACGCCA 28923 Query 221537 ATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGT 221594 ||||| | ||| | | ||||| | ||| | || |||| || || || |||||||| Sbjct 28924 ATGGGTCGGTGGCGCATGTTGCTGTTGCGCGC-CTCCTGG-ACAGGGTAGTGGTTGACGT 28981 Query 221595 CGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGAT 221654 |||| | ||||||||||| || | ||| | || || |||||||| Sbjct 28982 CGATGATCTTGTTGAGGTTGCGAACAACGACCTGGGTGACTTCATGCAGCTTCT------ 29035 Query 221655 TGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGG 221714 |||| | | || || |||| | | || ||||| ||| || || | | Sbjct 29036 TGAAGTCGTA---GCACCCCTCGTTGTAG---TCAACAAAGGCGGGCAGAGCCAAAGACG 29089 Query 221715 CCAGGTTACACACGGCCACCTCGTCCTTGTTG----GTATACTGTATGATCTCTGTACAG 221770 ||||||| ||||| ||||||||||| | | |||| | |||||||| || || Sbjct 29090 CCAGGTTGCACACAGCCACCTCGTCA--GGAGCACAGTATTCG--ATGATCTCAGTGCAC 29145 Query 221771 AGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCC 221830 |||||| || |||||| ||||||| || || || ||| || ||| || ||| Sbjct 29146 AGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTTCGGTTGCAGGCATCC 29205 Query 221831 TTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGT 221890 ||||||||||| || || |||||||||| ||| || ||| || || ||| || Sbjct 29206 TTGTAGAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCTTCCAAGATGGAGTACCACAGC 29265 Query 221891 TCTCTGGCGCTCACCG--TCCTCTTGACTGCACCCTCGGTCTTTT---CATACCCG--GT 221943 | ||||| || ||| | |||| || ||| | | || || ||||| || Sbjct 29266 T-TCTGG-GC---CCGGATGGTCTT-ACG--ACCTTTGCCCTGTTGCTCATACTTTTCGT 29317 Query 221944 ATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACA 222003 | ||||| | | |||| || || || || ||||||| || || | ||| || Sbjct 29318 ACAGAGCCT--CGAACTCATCGCCATAGCAATCAGCCAGGCCAGGGCATTCGTTGGGGCA 29375 Query 222004 CATCAGACTCCAGT-GC--TTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCA 222060 ||| || |||||| || || || || ||| | || ||||||||| || |||||||| Sbjct 29376 CATGAGGGTCCAGTCGCCATTCTTCTC---GACACGCTTCATGAAGAGATCGGGGATCCA 29432 Query 222061 CAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATC 222120 ||| || | || || || | | || ||||||| ||||| ||| |||| |||||| Sbjct 29433 CAGAGCAAGGAACAGGTCACGAGCACGAGCCTCCTCCTTGCCGTGGTTCTTCCGCAGATC 29492 Query 222121 CAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCG 222180 | ||||| || | |||||||||||||||||||| |||| ||| | |||||||||||| Sbjct 29493 GAGGAACTCGAAGACATCAGCGTGCCACGGCTCCAGGTAGATGGCGAAAGCGCCGGGTCG 29552 Query 222181 CTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTA 222239 ||||||||| ||||| || || || | || | |||||| | ||||| | || Sbjct 29553 CTTGTTGCCGCCCTGGTCGACGTATCTGGC-AGTGTTGTTGAACACCCGAAGCATGGGGG 29611 Query 222240 CCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC 222299 | |||||||| ||||||||||| |||||| | || ||| | || ||| Sbjct 29612 TGACACCGTTGGAAGTGCCGTTGGTGCCGGCAATGTAGGATCCAGTGGCAC---GGATAC 29668 Query 222300 TG---GCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAG 222356 | | || |||||| ||||| || || ||||||||||| || ||||||| | Sbjct 29669 GGTGAACGTTCAGGCCGATGCCACCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGG 29728 Query 222357 TGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCT 222416 |||| ||| ||||| || ||||||||| | | | || || ||||| |||| || Sbjct 29729 TGTCGTAGATACCCTCTATGCTGTCCTCCTTCATATCGACAAGGAAGCAAGAGGACAGCT 29788 Query 222417 GAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAG 222476 | | | || | | || || ||||||||||| |||||| || ||| | || | Sbjct 29789 GGGCCTGGGGCGTGCCCGCATTGAACAGCGTGGGCGAGGCGTGGGTGAAGAACTTGCTGG 29848 Query 222477 ACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCG 222535 |||| || | ||||||||| | ||| | | |||| ||| ||| || | | | |||| Sbjct 29849 ACATGAGGTTGTACGTCTCAATGACACGCTCAATGTCGTCTCCCCAGATGCCG-ACGGCG 29907 Query 222536 CATCTCATGTACATGTACTGGGGCCTCTCCACAGGAC--CCTTGGAGCTGGAGAGCAGGT 222593 | ||| ||||| || || | ||| ||| | || | ||||| |||| |||| Sbjct 29908 ACACGCATAATCATGTGTTGCGGGCGCTCAACAATCCTACCGTTGAGCTTGAGA--AGGT 29965 Query 222594 ACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCA 222653 |||| |||||||||||||| || ||||| | || ||||| | | | | || | Sbjct 29966 ACGAGCGCTCCAGAGTCTTGAAGCCGAAGTACTGATAGTTGAAGTCGCGGTCATAGACAA 30025 Query 222654 CGGCGGCGTCCAGCTCCGACTTGTG 222678 ||||| ||| ||||| |||||| Sbjct 30026 TGGCGGAGTCGAGCTCATCCTTGTG 30050 Score = 104 bits (114), Expect = 4e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | ||| || | | ||||| | ||| |||||| | || Sbjct 28512 GTTAACGACCTGGAACTCGCCAGCGAGGACTCGTCGTTGGTAGATGTTGGAAGTGTAAGG 28571 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || |||||||||||||| |||||||| |||||| || ||||||||||| || | Sbjct 28572 CTCGAAGCACTCGTTGTTGCCCAAGATCTGAGACGTGCTAGCAGTGGGCATGGGAGCAAG 28631 Query 221236 CAGCAGACTGTTGCG 221250 |||| |||||||| Sbjct 28632 GAGCAAGCTGTTGCG 28646 >seq333 Length=313450 Score = 140 bits (154), Expect = 6e-28 Identities = 321/489 (66%), Gaps = 5/489 (1%) Strand=Plus/Minus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 |||||||| ||||||| | | || | | | |||| |||| ||||| ||||| Sbjct 166565 TGGGCCATCCGGTGGATCCAGGACAAGGACTCGTCCTTTGCTCAGCGCCTGGTTGCCTTC 166506 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 || || || ||||||||||| ||||||||| | ||||| |||| || ||||||||| || Sbjct 166505 GCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTTGCTTCCATTTTTTGGCTCAAGAAG 166446 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 || ||||||||| ||| ||| || |||||||||||| | ||||||||||| Sbjct 166445 CGTGGCCTCATGCCCGGCCTGACCTTCTCGAACGAGCTCATCTCGCGAGACGAGGGTCTG 166386 Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGAG 26073 |||| || ||||||||||| || || | |||| || ||| | || || Sbjct 166385 CACACCGACTTTGCCTGCCTCCTGCACTC---CCACATGAAGCACCGTGCCAGCAAAAAG 166329 Query 26074 ACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNN 26133 | || | ||||||| || ||||| || ||| ||||||| Sbjct 166328 GTCATCGAGGACATCATCACGGACGCTGTCACCATTGAGCAGGAGTTCTTGACTGAGGCC 166269 Query 26134 NNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTATGTG 26193 | ||||||||| || | |||| || ||||| |||| || Sbjct 166268 CTGCCCTGCGCGCTGCTCGGCATGAACGCCAATTTGATGAAGCAGTACATCGAGTTCGTC 166209 Query 26194 GCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCCGTT 26252 ||||||| ||||| ||| | || || | | | |||| || | ||||| || Sbjct 166208 GCCGACCGCCTGCTCGTGGC-CCTCGGCAATGAGAAGGTGTACAAGTCGTCCAACCCCTT 166150 Query 26253 CGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGG 26312 |||||| ||||| ||||| || ||| || ||||||||||||||||| ||| | ||||| Sbjct 166149 CGACTTCATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTTGAGAAGCGTGTCGG 166090 Query 26313 CGACTATCA 26321 ||||| || Sbjct 166089 TGACTACCA 166081 Score = 96.9 bits (106), Expect = 6e-15 Identities = 177/258 (69%), Gaps = 5/258 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| || || |||||| || |||||||| || || Sbjct 166980 ATCTGGCAAATGTACAAGAAGGCCGAAGCTTCTTTCTGGACAGCTGAAGAGATCGACCTC 166921 Query 25537 GCCAAGGACATGGACGGCTGGTA----CGCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 |||| ||| || ||| |||| | ||| || | | || ||| | | ||| || Sbjct 166920 TCCAAAGACTTGCACGACTGGAACAACCGC-CTGAACGATGATGAGAGGTACTTTGTCTC 166862 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 || | |||| ||||| || ||||| ||||| || || |||||||| || |||| | Sbjct 166861 TCACATCCTGGCCTTCTTCGCCGCCTCCGATGGCATTGTCAACGAGAACCTCGTCGAGCG 166802 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||||| | | || || ||| | |||||| || |||||||| |||||||| || Sbjct 166801 ATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGATTCCAGATCATGAT 166742 Query 25713 CGAAAATGTGCACTCTGA 25730 || || | |||||||| Sbjct 166741 GGAGAACATCCACTCTGA 166724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928839412700160