Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Sup5_20PDA- 1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq211 118 3e-21 seq333 114 4e-20 >seq211 Length=399506 Score = 118 bits (130), Expect = 3e-21 Identities = 381/585 (65%), Gaps = 20/585 (3%) Strand=Plus/Plus Query 155586 CCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGT---CGCTGTATTCTACAATC 155642 |||| ||||||||| || || || || | ||| ||| | | |||||| | ||| Sbjct 29081 CCAA-AGACGCCAGGTTGCACACAGC---CACCTCGTCAGGAGCACAGTATTCGATGATC 29136 Query 155643 TCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTA 155702 ||| ||||||||| || || ||||||||| | ||||||||||| || | ||| Sbjct 29137 TCAGTGCACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTTCGGTTG 29196 Query 155703 CAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTT 155762 || ||||||||||| || ||| | ||| | || |||||| |||| || |||| || Sbjct 29197 CAGGCATCCTTGTAGAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCTTCCAAGATGGAG 29256 Query 155763 AGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATA--TTTCA 155820 ||| || | |||| || ||| | |||| | |||||| |||| Sbjct 29257 TACCACAGCTTCTGGGCCCGGATGGTCTTACGACCTTTGCCCTGTTGCTCATACTTTTCG 29316 Query 155821 TATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGC 155880 || | ||| | | | || || || || |||||| ||| |||||||| | | ||||| Sbjct 29317 TACAGAGCCT--CGAACTCATCGCCATAGCAATCAGCCAGGCCAGGGCATTCGTTGGGGC 29374 Query 155881 AAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCC 155937 | | || | ||| || || || ||||||| ||| || | ||| || Sbjct 29375 ACATGAGGGTCCAGTCGCCATTCTTCTCG---ACACGCTTCATGAAGAGATCGGGGATCC 29431 Query 155938 AAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCT 155997 | | |||| ||| ||||| | || | |||||| | |||||| |||||||| || | Sbjct 29432 ACAGAGCAAGGAACAGGTCACGAGCACGAGCCTCCTCCTTGCCGTGGTTCTTCCGCAGAT 29491 Query 155998 CTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---AT 156054 | | ||| || | ||||| || |||||||| || || || ||| || Sbjct 29492 CGAGGAACTCGAAGACATCAGCGTGCCACGGCTCCAGGTAGATGGCGAAAGCGCCGGGTC 29551 Query 156055 TCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAA 156114 | | ||||| ||||| || || || | ||||| || ||||| || | ||||| || Sbjct 29552 GCTTGTTGCCGCCCTGGTCGACGTATCTGGCAGTGTTGTTGAACACCCGAAGCATGGGGG 29611 Query 156115 TAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAG 156159 | | ||| ||||||||||| ||||| ||| ||| | || |||| Sbjct 29612 TGACACCGTTGGAAGTGCCGTTGGTGCCGGCAATGTAGGATCCAG 29656 >seq333 Length=313450 Score = 114 bits (126), Expect = 4e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 133439 CCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGT 133498 ||||| ||| ||||| | |||||||| || ||||||||||||||| || Sbjct 166589 CCTTGCATTCGCAAGAAGGCCGACTGGGCCATCCGGTGGATCCAGGACAAGGACTCGTCC 166530 Query 133499 TTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTC 133558 |||||| || || ||||| || || | || |||||||| || ||||| ||||| || Sbjct 166529 TTTGCTCAGCGCCTGGTTGCCTTCGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTT- 166471 Query 133559 TGCT-CTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGA 133617 |||| | ||||||||||| || |||||||| | | || || ||| || || ||||| Sbjct 166470 TGCTTCCATTTTTTGGCTCAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCGAACGA 166411 Query 133618 ACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 || || || | ||||||| || |||||||| |||||| Sbjct 166410 GCTCATCTCGCGAGACGAGGGTCTGCACACCGACTTTGCC 166371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471808850044368