Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Sup5_20PDA- 1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq211 237 2e-57 seq333 102 9e-17 seq221 87.8 2e-12 >seq211 Length=399506 Score = 237 bits (262), Expect = 2e-57 Identities = 396/566 (70%), Gaps = 6/566 (1%) Strand=Plus/Minus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||||| |||||| | || ||| || |||||| ||||||| |||||||||| || Sbjct 29915 ATGCGTGTCGCCGTCGGCATCTGGGGAGACGACATTGAGCGTGTCATTGAGACGTACAAC 29856 Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314 | ||| | |||| ||| || |||||| |||| || |||||||| || || ||| Sbjct 29855 CTCATGTCCAGCAAGTTCTTCACCCACGCCTCGCCCACGCTGTTCAATGCGGGCACGCCC 29796 Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374 || | ||| |||| |||||||| || | |||||||| ||| || || || ||| Sbjct 29795 CAGGCCCAGCTGTCCTCTTGCTTCCTTGTCGATATGAAGGAGGACAGCATAGAGGGTATC 29736 Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 ||||| || |||||| |||||| ||||||||| | | ||||| ||||| | || Sbjct 29735 TACGACACCCTCAAGACTTGTGCCATGATCTCCAAGATGGCTGGTGGCATCGGCCTGAAC 29676 Query 53435 TGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 | || | ||| |||||| | || | || || || |||||| || | | Sbjct 29675 -GTTC-ACCGTATCCGTGCCACTGGATCCTACATTGCCGGCACCAACGGCACTTCCAACG 29618 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 | || || ||||| || || ||||||||||| ||| | |||||| ||||||| || Sbjct 29617 GTGTCACCCCCATGCTTCGGGTGTTCAACAACACTGCCAGATACGTCGACCAGGGCGGCA 29558 Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612 ||||| || | |||||||||||||| |||||||||||||| || | | |||| Sbjct 29557 ACAAGCGACCCGGCGCTTTCGCCATCTACCTGGAGCCGTGGCACGCTGATGTCTTCGAGT 29498 Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACA 53671 | ||||| ||||| ||| || || | || ||| || ||| ||||||||||| Sbjct 29497 TCCTCGATCTGCGGAAGAACCACGGCAAGGAGGAGGCTCG-TGCTCGTGACCTGTTCCTT 29439 Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731 ||||||||||| || || ||||||||| | || |||||| | | || ||| ||| Sbjct 29438 GCTCTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGAATGGCGACTGGACCCTC 29379 Query 53732 ATGTGCCCGAACGAGTGCCCCGGCCT 53757 |||||||| ||||| ||||| ||||| Sbjct 29378 ATGTGCCCCAACGAATGCCCTGGCCT 29353 Score = 98.7 bits (108), Expect = 1e-15 Identities = 303/453 (67%), Gaps = 23/453 (5%) Strand=Plus/Minus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||| | ||||| | || || ||||| || || ||| |||||||| |||||||| Sbjct 28646 CGCAACAGCTTGCTCCTTGCTCCCATGCCCACTGCTAGCACGTCTCAGATCTTGGGCAAC 28587 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| |||||||| ||||| |||||||||||| || || ||| || || ||| Sbjct 28586 AACGAGTGCTTCGAGCCTTACACTTCCAACATCTACCAACGACGAGTCCTCGCTGGCGAG 28527 Query 55604 TT---TGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAAC 55660 || ||| | | | || | || |||||||||| | || ||| Sbjct 28526 TTCCAGGTCGTTAAC-CCATG--GCTGCTCAAGGACCTCGTTGATATGGGTCTCTGG--T 28472 Query 55661 CCGCAG--ATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGA--ATCTGGA 55713 ||| | || |||| || || ||| |||| || || |||||| ||| | Sbjct 28471 CCGATGCTATGAAGAACCGCATCATTTCTGAGAAC---GGTTCGATCCAGAACATCCCCA 28415 Query 55714 GATTCCTCTG-CGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAG-AAGAG 55770 ||| ||| || | |||||| | ||| ||| || ||||||||| | ||| | || Sbjct 28414 ACATCC-CTGCCGACATCAAGGCTCTGTACAAGACCGTCTGGGAGATTTCTCAGCGACAG 28356 Query 55771 TCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACAT 55830 || | | ||| ||| || || ||||| | ||| |||||||| || || || ||||| Sbjct 28355 GTTG-TGCAGATGTCTGCCGACCGCGGTGCTTTCATTGACCAGTCTCAATCCCTCAACAT 28297 Query 55831 CTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAA 55890 | |||| || |||| || ||| |||| | | | |||||||| ||| |||||| Sbjct 28296 CCACATGAAGGATCCCTCGATGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCT 28237 Query 55891 GGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923 || || |||||||| |||||||| ||||| || Sbjct 28236 TGGCCTGAAGACGGGCATGTACTACCTGCGCAC 28204 >seq333 Length=313450 Score = 102 bits (112), Expect = 9e-17 Identities = 302/456 (66%), Gaps = 20/456 (4%) Strand=Plus/Plus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || |||||||| ||||| ||||| ||||||||||| || ||| |||||||||||||| Sbjct 166084 TAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCATG 166143 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCC---CCAAACTGTGCCATGAG- 74578 ||||||| ||||| | ||| | |||||| || | | |||| ||| Sbjct 166144 AAGTCGAAGGGGTTGGACGACTTGTACAC---CTTCTCATTGCCGA---GGGCCACGAGC 166197 Query 74579 --GCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGT 74636 ||| || || || || | ||||||||| |||| || | |||||||| || Sbjct 166198 AGGCGGTCGGCGACGAACTCGATGTACTGCTTCATCAAATTGGCGTTCATGCCGAGCAGC 166257 Query 74637 TTGCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGC--CCATTGGACAA 74694 ||| ||||| ||||| || | ||||| ||| | | ||| || | || | Sbjct 166258 GCGCAGGGCAGGGCCTCAGTCAAGAACTCCTGCTCAATGGTGACAGCGTCCGT--GATGA 166315 Query 74695 TCTTGTGAATGTC-TTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGC 74752 | | | ||| | ||| ||||| | | ||| ||| |||| || | || ||| Sbjct 166316 TGTCCTCGATGACCTTTTTGCTGGCACGGTGCT-TCATGTGGGAGTGCAGGAGGCA-GGC 166373 Query 74753 AAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGG 74812 ||| || ||| || || |||| || | || ||||| || | ||||| || Sbjct 166374 AAAGTCGGTGTGCAGACCCTCGTCTCGCGAGATGAGCTCGTTCGAGAAGGTCAGGCCGGG 166433 Query 74813 CATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCC 74872 ||| || ||||||||||| | |||||| |||| | |||| ||| |||||||||||||| Sbjct 166434 CATGAGGCCACGCTTCTTGAGCCAAAAAATGGAAGCAAAGGCACCGCTGAAGAAGATGCC 166493 Query 74873 TTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA 74908 ||||| || ||||| || ||||| || || || Sbjct 166494 CTCGACGGCGGCGAAGGCAACCAGGCGCTGAGCAAA 166529 >seq221 Length=1337442 Score = 87.8 bits (96), Expect = 2e-12 Identities = 230/344 (67%), Gaps = 8/344 (2%) Strand=Plus/Minus Query 152770 TTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAGA 152829 |||| || | ||||||||| || || || ||||| |||| ||||||||||| Sbjct 851532 TTGATGAGAAGGCCCTTGATATGGCTACCATCGTGATCCTGATCGGCCATGATCATCAAG 851473 Query 152830 CGACCGTAGCGCAGGTCACGTAGTGACCCGTAGACCTTTCC--ATGTTGAAGCCCGAGGA 152887 | |||||||| ||| | | | ||| || ||| || || | ||| | || || | || Sbjct 851472 TGGCCGTAGCGAAGG-CTCTTCGTGTCC-GTATACACTTGCTTATGCTTCAGGCCCAAGA 851415 Query 152888 TCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGAA 152947 || |||| ||| | |||| || | ||| | ||| | | || |||||| || | Sbjct 851414 ACTGCTTGATGTTTTGGATCTCCTGGTTCTTGGTAATCTGATCAATCGAGGCATCTCGCA 851355 Query 152948 CATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGG--CCTACAACGCT 153005 | || | ||||||| ||||| || || ||||| || ||| | || || | ||| Sbjct 851354 CGTTCAACAGCTTTCCTCGGAGGGGGAAGACGCC-AATGCGATCAGGGTCCAGGATAGCT 851296 Query 153006 CAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGTC 153065 | | || | || || || | || ||||||||||| || || | || ||||| || || Sbjct 851295 CTG-CCAGAAACCGCCAGACCCTTGGCCGAGTCACCTTCCGTCAGGATGAGCGTGCATTC 851237 Query 153066 GTGAGACCGATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109 ||| || | || || ||| ||||||| ||| ||||||||| Sbjct 851236 GTGGCCACGCCGCGTCCCCGCCAAGTTGGCTTCGACAAGCTTGG 851193 Score = 84.2 bits (92), Expect = 2e-11 Identities = 89/116 (77%), Gaps = 6/116 (5%) Strand=Plus/Minus Query 119075 CTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTGCTCC 119134 ||||| |||||| |||||||| ||||||||||| || |||||| ||| || || Sbjct 850380 CTGAAGACGTTGCAGAGCTTGGCTCCGTATCCGTTGCGGCCACCG---ACGGTCTTCTGT 850324 Query 119135 TCGTCGTTGT---AGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187 |||| || || ||||||||| | ||| || || ||||||||||||||||| || Sbjct 850323 TCGTTGTCGTCAAAGTTGGAGCCAGCCAACAGATGACCAAAGATGAGCTCGGGAAT 850268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212826147200