Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Sup5_20PDA- 1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq410 109 4e-19 >seq410 Length=1178163 Score = 109 bits (120), Expect = 4e-19 Identities = 274/407 (67%), Gaps = 22/407 (5%) Strand=Plus/Minus Query 30061 CACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30117 |||||| ||||| | ||||| ||||| || || || |||||| || ||| || Sbjct 1092556 CACGTAGAACTGGGCAAACATG---TGGCAAGGCGGCAGGGCCATGCTCTTCAGGTCCTT 1092500 Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTC 30174 ||||||||||| ||| ||| || || | ||| | || || ||| | || | Sbjct 1092499 TGGGTTCCAGGCAGACATGATTATACGGCGGTCGTACGGCTTCGTCCGCAGCTTGTGTAT 1092440 Query 30175 CACGGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGT 30233 |||| || || ||||| || || ||| |||| |||||||| | | ||| || Sbjct 1092439 CACGTCG----GCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGTCTTTGCATCCACGT 1092384 Query 30234 ACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCC 30293 |||| || || || |||| ||||||||||||||| || || |||| || || | || | Sbjct 1092383 ACTCGGCGCCAAAGTGCCGCCACTGGAACCCGTAGACGGGCCCCAAATCGCCGACCTCGC 1092324 Query 30294 TGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA 30353 |||| | ||| |||| | | || | || |||||| | ||||||||||| | Sbjct 1092323 GGTGCGACAGGCCGACGCTGTCGAGGTACTCGCGCGACCCGTTGCCATCCCAGATCTTGA 1092264 Query 30354 CCC---CCT-TCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGC 30409 | | ||| ||||| | | | || || | ||| |||| || ||||||||||||| Sbjct 1092263 CGCCGGCCTCGCTCAGCGCGAGCGATGACGTGT-TGG--CCTC-GATGAACCACAGCAGC 1092208 Query 30410 TCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 || | |||||||| ||| ||||| | ||| || || ||||| || Sbjct 1092207 TCGGCGACGACGGCTTTCAGGAAGACGCGCTTCGTGGTCAGGAGTGG 1092161 Score = 95.1 bits (104), Expect = 1e-14 Identities = 134/181 (74%), Gaps = 8/181 (4%) Strand=Plus/Plus Query 52730 CGTCAAGGTGAGGCTGAGGGCCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGT- 52788 |||||||||| || || | || ||| | ||| |||| || |||||||||||||| Sbjct 326809 CGTCAAGGTGCGGGTGCGAACCACCAAGATCCCCCAGATCGGAGACAAGTTTGCGTCTCG 326868 Query 52789 TCACGGCGCAAAAGGGGACGTGCGGAGC--CGTCCTGACCCAGGAGGACATGCCCTTCGA 52846 |||||| |||||||| || ||| | ||| | ||| | ||||||||||| || | Sbjct 326869 TCACGGT-CAAAAGGGTACCATCGGCGTGACGTACCGAC--AAGAGGACATGCCGTT-TA 326924 Query 52847 CAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGA 52905 | || || || ||| ||||||| ||||||||||||||||||| |||| || | |||| Sbjct 326925 CGAGAGAGGGCGTGACGCCCGACATCATCATCAACCCCCACGCTATTCCGTCGCGAATGA 326984 Query 52906 C 52906 | Sbjct 326985 C 326985 Score = 84.2 bits (92), Expect = 2e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 29864 AGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTG- 29922 ||||| ||| || | || |||| || || |||| ||| ||||| |||| | ||| Sbjct 1092834 AGCTGCTCCTTGAGTGCATCGACGTGGTCGAGATAGATGTGGGCGTCCCCCATGACGTGC 1092775 Query 29923 GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTA 29982 | || || || || | ||| || || || | | ||||| ||| || || | ||| Sbjct 1092774 GTCAGGCTG-CCGGGCACCAGCTCGCACACATGGGAAAGCATGTGCGTCAGCAGCGCGTA 1092716 Query 29983 GCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 30042 |||||| ||||| || || || ||||| |||||||| | ||||||||||| |||||||| Sbjct 1092715 GCTGGCAATGTTGAACGGGACGCCGAGGCCCATGTCGCAGGACCTCTGGTACAGCTGACA 1092656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406308102314688