Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Sup5_20PDA- 1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq410 104 2e-17 >seq410 Length=1178163 Score = 104 bits (114), Expect = 2e-17 Identities = 137/181 (76%), Gaps = 8/181 (4%) Strand=Plus/Plus Query 48510 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTC-CT 48568 |||||||||| || || | ||| ||| | ||| |||| || |||||||||||||| | Sbjct 326809 CGTCAAGGTGCGGGTGCGAACCACCAAGATCCCCCAGATCGGAGACAAGTTTGCGTCTCG 326868 Query 48569 TCACGGCGCAAAAGGGGAC-ATGTG-GAGCCGTCCTGACCCAGGAGGACATGCCCTTCGA 48626 |||||| |||||||| || || | | | ||| | ||| | ||||||||||| || | Sbjct 326869 TCACGGT-CAAAAGGGTACCATCGGCGTGACGTACCGAC--AAGAGGACATGCCGTT-TA 326924 Query 48627 CAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGA 48685 | || || || ||| ||||||| ||||||||||||||||||| |||| || | |||| Sbjct 326925 CGAGAGAGGGCGTGACGCCCGACATCATCATCAACCCCCACGCTATTCCGTCGCGAATGA 326984 Query 48686 C 48686 | Sbjct 326985 C 326985 Score = 93.3 bits (102), Expect = 3e-14 Identities = 255/383 (67%), Gaps = 16/383 (4%) Strand=Plus/Minus Query 27348 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 27407 |||||| || || || |||||| || ||| || ||||||||||| ||| ||| || Sbjct 1092535 GTGGCAAGGCGGCAGGGCCATGCTCTTCAGGTCCTTTGGGTTCCAGGCAGACATGATTAT 1092476 Query 27408 GCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCCACGGCGTTTTGC-AGCTGATCCA 27463 || | ||| | || || ||| | || | |||| || || ||||| || | Sbjct 1092475 ACGGCGGTCGTACGGCTTCGTCCGCAGCTTGTGTATCACGTCG----GCGAGCTGGTCGA 1092420 Query 27464 CCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATT 27523 | ||| |||| ||||||| | | ||| |||||| || || || |||| ||| | Sbjct 1092419 CGCCCTGGCCCGTGTAGTCTGTCTTTGCATCCACGTACTCGGCGCCAAAGTGCCGCCACT 1092360 Query 27524 GGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCA 27583 |||||||||| || || |||| || || | || | |||| | ||| |||| | Sbjct 1092359 GGAACCCGTAGACGGGCCCCAAATCGCCGACCTCGCGGTGCGACAGGCCGACGCTGTCGA 1092300 Query 27584 AAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC---CCT-TCTCGGAGAGCTCT 27639 | || | || |||||| | ||||||||||| || | ||| ||| | | | | Sbjct 1092299 GGTACTCGCGCGACCCGTTGCCATCCCAGATCTTGACGCCGGCCTCGCTCAGCGCGAGCG 1092240 Query 27640 TTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAG 27699 || || | ||| |||| || ||||||||||||||| | |||||||| ||| ||| Sbjct 1092239 ATGACGTGT-TGG--CCTC-GATGAACCACAGCAGCTCGGCGACGACGGCTTTCAGGAAG 1092184 Query 27700 ACCCTCTTGGTCGTGAGGAGGGG 27722 || | ||| || || ||||| || Sbjct 1092183 ACGCGCTTCGTGGTCAGGAGTGG 1092161 Score = 87.8 bits (96), Expect = 1e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 27130 AGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTG- 27188 ||||| ||| || | || ||||| || || |||| ||| ||||| |||| | ||| Sbjct 1092834 AGCTGCTCCTTGAGTGCATCGACGTGGTCGAGATAGATGTGGGCGTCCCCCATGACGTGC 1092775 Query 27189 GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTA 27248 | || || || || | ||| || || || | | ||||| ||| || || | ||| Sbjct 1092774 GTCAGGCTG-CCGGGCACCAGCTCGCACACATGGGAAAGCATGTGCGTCAGCAGCGCGTA 1092716 Query 27249 GCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308 |||||| ||||| || || || ||||| |||||||| | ||||||||||| |||||||| Sbjct 1092715 GCTGGCAATGTTGAACGGGACGCCGAGGCCCATGTCGCAGGACCTCTGGTACAGCTGACA 1092656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369505110436784