Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tolypocladium_20sp._20Sup5_20PDA- 1_20[genbank_20GCA_5F000750105.3_202015-07-09] 464 sequences; 37,874,995 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq332 156 1e-32 seq79 147 5e-30 seq221 131 4e-25 >seq332 Length=1201059 Score = 156 bits (172), Expect = 1e-32 Identities = 154/199 (77%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || ||||| || || || ||||||||||||||||| ||| |||||||||| Sbjct 624660 TCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCCTCCGACACCATCG 624719 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || || || |||||||||||||| || || || || ||||| ||||| || || | Sbjct 624720 ACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAGCAGCGCCTGA 624779 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||||||||||| |||||||| ||||| | || || ||||||| ||| | || || | Sbjct 624780 TCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGTCCGATTACAACATTCAGAAGG 624839 Query 178111 AATCAACACTGCATCTTGT 178129 | || || || || ||||| Sbjct 624840 AGTCGACGCTCCACCTTGT 624858 Score = 134 bits (148), Expect = 3e-26 Identities = 156/209 (75%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || ||||| || || || || || || |||||||| |||||||||||| ||| Sbjct 624881 CAGATCTTCGTCAAGACCCTGACGGGCAAGACGATCACGCTCGAGGTGGAATCGAGC--- 624937 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 || |||||||| |||||||| ||||| ||||| || || || ||||| ||||| ||| Sbjct 624938 GATACCATCGACAACGTCAAGTCGAAGATCCAGGATAAGGAGGGTATCCCCCCGGATCAG 624997 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || ||||| ||||| ||||| || ||||| || || || | || || ||| || ||| Sbjct 624998 CAGCGACTCATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGAACCCTCAGCGACTACAAC 625057 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || |||||||| || Sbjct 625058 ATCCAGAAGGAGTCTACCCTGCATCTGGT 625086 Score = 122 bits (134), Expect = 2e-22 Identities = 139/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || || || || ||||| || ||| ||||| ||||| || || || Sbjct 624377 TCACGGGCAAGACCATTACTCTTGAGGTCGAGTCCTCCGACACTATCGACAATGTGAAGT 624436 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 |||||||||||||| || || || || ||||| ||||| || || ||||||||||||| Sbjct 624437 CCAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAGCAGCGCCTGATCTTCGCCGGAA 624496 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | |||||||| ||||| | || || |||| || ||| |||| || || || || || | Sbjct 624497 AGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTTC 624556 Query 178123 ATCTTGT 178129 | || || Sbjct 624557 ACCTCGT 624563 Score = 116 bits (128), Expect = 9e-21 Identities = 152/209 (73%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| ||||| || ||| | || || || || ||||| || ||||||||| ||| Sbjct 625109 CAAATCTTCGTCAAGACTTTGACTGGCAAGACAATCACGCTGGAGGTGGAATCGAGC--- 625165 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||||||||| |||||||| ||||| |||||||| || || || || ||||| ||| Sbjct 625166 GACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAG 625225 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||| || || || ||||| || || || | || || ||| || ||| Sbjct 625226 CAGCGTCTCATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGCACCCTGAGCGACTACAAC 625285 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || ||||| ||||| Sbjct 625286 ATCCAGAAGGAGAGCACTCTGCACCTTGT 625314 >seq79 Length=585314 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || ||||||||||| |||||||| || ||| Sbjct 160549 CAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 160490 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 160489 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAG 160430 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| ||||| | || || ||| || ||| || Sbjct 160429 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATC 160370 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || || Sbjct 160369 CAGAAGGAGAGCACCCTGCACCTGGT 160344 >seq221 Length=1337442 Score = 131 bits (144), Expect = 4e-25 Identities = 137/180 (76%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||||||||| || || || || || || |||||||| ||||| || ||| ||||| || Sbjct 132297 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 132356 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || ||||| ||||| |||||||| || || || || ||||| ||||| ||| | Sbjct 132357 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAGCGATT 132416 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||||||||| || |||||||| ||||| | || || |||| || ||| |||| || Sbjct 132417 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTGTCCGACTACAACATCCAGAA 132476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203724043818016