Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1 120 6e-22 >seq1 Length=8525130 Score = 120 bits (132), Expect = 6e-22 Identities = 163/225 (72%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATG 230472 |||||||| || || ||| |||| || ||| || | ||||||||||| | || ||| Sbjct 3939648 AGGAGTTCCTTACCGAGGCTCTTCCTTG-CGCTCTGCTCGGCATGAACGCCAACCTCATG 3939706 Query 230473 GGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTG 230532 |||||||| || ||||| || || || | | || || ||||| ||||||| | Sbjct 3939707 AAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTCGTCGCTCTTGGCAACGAGAAGATT 3939766 Query 230533 TACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAAC 230592 ||||| || | |||||||| | || |||||| ||| || ||| || ||||||||| Sbjct 3939767 TACAAGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAAC 3939826 Query 230593 TTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||||||| |||||||| | || || |||| | | ||||| ||| Sbjct 3939827 TTCTTCGAGAAGCGTGTTGGCGAGTACCAGAAGGCCGGTGTCATG 3939871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823647612380