Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1 141 1e-28
>seq1
Length=8525130
Score = 141 bits (156), Expect = 1e-28
Identities = 570/883 (65%), Gaps = 25/883 (3%)
Strand=Plus/Minus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| |||| ||| || || ||||| ||||| || ||||| | || || || ||||||
Sbjct 3939855 TGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCC 3939796
Query 16736 ATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
||||| || || || || || | || |||| || | | | || || || ||| |
Sbjct 3939795 ATGAAGTCGAAGGGGTTGGTGGACTTGTAAATCTTCTCG--TTGCCAAGAGCGACGAGGA 3939738
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA- 16852
| ||| || || || || || || || ||| | | | |||||| || | |||
Sbjct 3939737 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGCAGAG 3939678
Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912
|| | |||||||| || || | || ||||| || || || || | || ||
Sbjct 3939677 CGCAA-GGAAGAGCCTCGGTAAGGAACTCCTGCTCAATGGTGACAGCGTCAGTGATGATG 3939619
Query 16913 CTAGCAA----CTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGC 16968
| |||| ||| || || | ||||| |||| | | || || || || ||
Sbjct 3939618 CCGGCAATGACCTCCTTGCTGGCACGGT---TGTTGAGG-TGGGAGTGCAGAAGGCAGGC 3939563
Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028
|| ||| || | |||||||| | ||| || ||||| || || |||| |||||
Sbjct 3939562 AAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGG 3939503
Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088
||| || || ||||| | ||| || || | ||| || | ||||| ||||| |||||
Sbjct 3939502 CATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAGATACC 3939443
Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148
|||||||| ||||| || | | || | || | || | || |||| | |||||
Sbjct 3939442 CTCGACGGCAGCAAAGGCAACGAGACGCTGAGCAAAGGTAGAGTTCTTGTCAGAGATCCA 3939383
Query 17149 TTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA 17207
||| | |||| ||||| || |||| || || || || || ||||| || || |
Sbjct 3939382 CTTCAGGGCCCAGTCGGCCTTCTTGCGG-ATACAGGGAATGGTCTCAATGGCGTTGAAGA 3939324
Query 17208 ATTTCTCTTTTTCCTG--TAGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATTT 17264
| | | ||| |||| || | | || ||||| || || ||| ||| | |
Sbjct 3939323 GGTA---TGTGCGCTGGGTAGGCTCCTTGACGTAGGTATCAATAAGCAGGGAGTATGTCT 3939267
Query 17265 CGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTT 17324
| ||||| ||||||||||| ||||| || ||||| ||||| || | || | || |
Sbjct 3939266 CAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGACCCTCGGGAATCT 3939207
Query 17325 GAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGA 17384
| || || | |||| || || || || ||||| || || ||||| ||||| |
Sbjct 3939206 GGACCTCGTTGGAGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCAGAGGCGGCAA 3939147
Query 17385 AAAACGCCAATATATGCTTAATGAAATATTTTTCGTC--CGGTG-TAAGAACGCGCCAGT 17441
| || || | || || ||||| ||||| ||||| || || | | | ||| |
Sbjct 3939146 AGAAGGCAAGAATGTGGGAGATGAAGTATTTCTCGTCATCGTTGAGACGGTTGTTCCAAT 3939087
Query 17442 CCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTT 17501
| | | ||| ||||| | ||| | |||||||| ||||| || ||| | ||||| |
Sbjct 3939086 CGTGCAGATCCTTGGAAAGATCGATTTCTTCGGCTGTCCAGAATGAGGCCTCGGCCTTCT 3939027
Query 17502 TATACATATTCCAAATATCATTGTATTGTATGGGGAATACAAC 17544
| ||||| | ||| || || | ||| | |||||||| | |||
Sbjct 3939026 TGTACATCTGCCAGATCTCGTGGTACTTGATGGGGAAGAGAAC 3938984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545431797680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |