Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1 141 1e-28 >seq1 Length=8525130 Score = 141 bits (156), Expect = 1e-28 Identities = 570/883 (65%), Gaps = 25/883 (3%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| |||| ||| || || ||||| ||||| || ||||| | || || || |||||| Sbjct 3939855 TGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCC 3939796 Query 16736 ATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||| || || || || || | || |||| || | | | || || || ||| | Sbjct 3939795 ATGAAGTCGAAGGGGTTGGTGGACTTGTAAATCTTCTCG--TTGCCAAGAGCGACGAGGA 3939738 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA- 16852 | ||| || || || || || || || ||| | | | |||||| || | ||| Sbjct 3939737 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGCAGAG 3939678 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 || | |||||||| || || | || ||||| || || || || | || || Sbjct 3939677 CGCAA-GGAAGAGCCTCGGTAAGGAACTCCTGCTCAATGGTGACAGCGTCAGTGATGATG 3939619 Query 16913 CTAGCAA----CTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGC 16968 | |||| ||| || || | ||||| |||| | | || || || || || Sbjct 3939618 CCGGCAATGACCTCCTTGCTGGCACGGT---TGTTGAGG-TGGGAGTGCAGAAGGCAGGC 3939563 Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028 || ||| || | |||||||| | ||| || ||||| || || |||| ||||| Sbjct 3939562 AAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGG 3939503 Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088 ||| || || ||||| | ||| || || | ||| || | ||||| ||||| ||||| Sbjct 3939502 CATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAGATACC 3939443 Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA 17148 |||||||| ||||| || | | || | || | || | || |||| | ||||| Sbjct 3939442 CTCGACGGCAGCAAAGGCAACGAGACGCTGAGCAAAGGTAGAGTTCTTGTCAGAGATCCA 3939383 Query 17149 TTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA 17207 ||| | |||| ||||| || |||| || || || || || ||||| || || | Sbjct 3939382 CTTCAGGGCCCAGTCGGCCTTCTTGCGG-ATACAGGGAATGGTCTCAATGGCGTTGAAGA 3939324 Query 17208 ATTTCTCTTTTTCCTG--TAGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATTT 17264 | | | ||| |||| || | | || ||||| || || ||| ||| | | Sbjct 3939323 GGTA---TGTGCGCTGGGTAGGCTCCTTGACGTAGGTATCAATAAGCAGGGAGTATGTCT 3939267 Query 17265 CGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTT 17324 | ||||| ||||||||||| ||||| || ||||| ||||| || | || | || | Sbjct 3939266 CAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGACCCTCGGGAATCT 3939207 Query 17325 GAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGA 17384 | || || | |||| || || || || ||||| || || ||||| ||||| | Sbjct 3939206 GGACCTCGTTGGAGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCAGAGGCGGCAA 3939147 Query 17385 AAAACGCCAATATATGCTTAATGAAATATTTTTCGTC--CGGTG-TAAGAACGCGCCAGT 17441 | || || | || || ||||| ||||| ||||| || || | | | ||| | Sbjct 3939146 AGAAGGCAAGAATGTGGGAGATGAAGTATTTCTCGTCATCGTTGAGACGGTTGTTCCAAT 3939087 Query 17442 CCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTT 17501 | | | ||| ||||| | ||| | |||||||| ||||| || ||| | ||||| | Sbjct 3939086 CGTGCAGATCCTTGGAAAGATCGATTTCTTCGGCTGTCCAGAATGAGGCCTCGGCCTTCT 3939027 Query 17502 TATACATATTCCAAATATCATTGTATTGTATGGGGAATACAAC 17544 | ||||| | ||| || || | ||| | |||||||| | ||| Sbjct 3939026 TGTACATCTGCCAGATCTCGTGGTACTTGATGGGGAAGAGAAC 3938984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545431797680