Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 4e-15
>seq1
Length=8525130
Score = 96.9 bits (106), Expect = 4e-15
Identities = 262/399 (66%), Gaps = 4/399 (1%)
Strand=Plus/Plus
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929
|||||||||||| | | |||||| || |||| |||||| || ||| |||
Sbjct 935323 ACGTAGAACTGGGCAAACATGTGGCATGGAGGCAAGGCCATCAGCTTCAAGTCGCGTGGG 935382
Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGG 145989
|||||||| | | || | || | | | ||| || |||| | || | ||||
Sbjct 935383 TTCCAGGCAGACATGATAATTCTTCGGTCGTAGGGTTTGTTCTTAAGCTTATCAATCACC 935442
Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049
|| ||||||||| |||||||| || ||| || | ||| | || ||||| ||
Sbjct 935443 TCGGCGAGCTGGTCGACGCCCTGGCCAGTGTAGTCAGCCTTCGCATCGACGTAGTTTGCG 935502
Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCC 146109
|| ||||| | ||||||||| |||||||||||||| || || || || | ||| ||
Sbjct 935503 CCAAAGTGACGCCACTGGAATCCGTAGACGGGCCCGAGATCACCAACTTCGCGGTGTCCA 935562
Query 146110 AGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CC 146167
|| || || | | ||| || || || || ||| | |||||||| |||| || |
Sbjct 935563 AGACCAGCGTTATCCAAGAACTCGCGCGAGCCATTGCCATCCCAGATTTTGATACCAGCT 935622
Query 146168 TCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGA 146227
|||| || | | | || |||| ||| | | ||||||||| ||||| ||| |
Sbjct 935623 TCGCTCAGTG--GAATCGACGACGTGCTGCCCTTTACGAACCAGAGGAGCTCACCGACAA 935680
Query 146228 CCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
| || | |||||| | ||| || || || || ||||
Sbjct 935681 CAGCCTTGAGGAAGACGCGCTTTGTTGTGAGGAGAGGGA 935719
Score = 84.2 bits (92), Expect = 3e-11
Identities = 121/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 145681 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCC 145740
|| || ||||| | || | ||||| ||||||||||| |||| ||| || | |||
Sbjct 935071 TTGAGAGGCTCGATATGATCAAGGTATACGTGCGCGTCACCCATGACATGTGTCAAGCTA 935130
Query 145741 CCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATG 145800
|| ||| | || | | | |||| ||||| ||||| ||| | |||||| || |||
Sbjct 935131 CCAGGCACAAGATCGCAAACACGAGCGAGCATGTGGGTCAACAGCGCGTAGCTAGCAATG 935190
Query 145801 TTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851
||||| ||||| || || ||||| || | || | ||||| |||||||||
Sbjct 935191 TTGAATGGCACACCAAGACCCATATCGCAAGATCTTTGGTAGAGCTGGCAG 935241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076608225040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |