Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 4e-15 >seq1 Length=8525130 Score = 96.9 bits (106), Expect = 4e-15 Identities = 262/399 (66%), Gaps = 4/399 (1%) Strand=Plus/Plus Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 |||||||||||| | | |||||| || |||| |||||| || ||| ||| Sbjct 935323 ACGTAGAACTGGGCAAACATGTGGCATGGAGGCAAGGCCATCAGCTTCAAGTCGCGTGGG 935382 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGG 145989 |||||||| | | || | || | | | ||| || |||| | || | |||| Sbjct 935383 TTCCAGGCAGACATGATAATTCTTCGGTCGTAGGGTTTGTTCTTAAGCTTATCAATCACC 935442 Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049 || ||||||||| |||||||| || ||| || | ||| | || ||||| || Sbjct 935443 TCGGCGAGCTGGTCGACGCCCTGGCCAGTGTAGTCAGCCTTCGCATCGACGTAGTTTGCG 935502 Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCC 146109 || ||||| | ||||||||| |||||||||||||| || || || || | ||| || Sbjct 935503 CCAAAGTGACGCCACTGGAATCCGTAGACGGGCCCGAGATCACCAACTTCGCGGTGTCCA 935562 Query 146110 AGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CC 146167 || || || | | ||| || || || || ||| | |||||||| |||| || | Sbjct 935563 AGACCAGCGTTATCCAAGAACTCGCGCGAGCCATTGCCATCCCAGATTTTGATACCAGCT 935622 Query 146168 TCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGA 146227 |||| || | | | || |||| ||| | | ||||||||| ||||| ||| | Sbjct 935623 TCGCTCAGTG--GAATCGACGACGTGCTGCCCTTTACGAACCAGAGGAGCTCACCGACAA 935680 Query 146228 CCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 | || | |||||| | ||| || || || || |||| Sbjct 935681 CAGCCTTGAGGAAGACGCGCTTTGTTGTGAGGAGAGGGA 935719 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 145681 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCC 145740 || || ||||| | || | ||||| ||||||||||| |||| ||| || | ||| Sbjct 935071 TTGAGAGGCTCGATATGATCAAGGTATACGTGCGCGTCACCCATGACATGTGTCAAGCTA 935130 Query 145741 CCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATG 145800 || ||| | || | | | |||| ||||| ||||| ||| | |||||| || ||| Sbjct 935131 CCAGGCACAAGATCGCAAACACGAGCGAGCATGTGGGTCAACAGCGCGTAGCTAGCAATG 935190 Query 145801 TTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 ||||| ||||| || || ||||| || | || | ||||| ||||||||| Sbjct 935191 TTGAATGGCACACCAAGACCCATATCGCAAGATCTTTGGTAGAGCTGGCAG 935241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076608225040