Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq3 125 6e-24 seq7 107 2e-18 seq1 84.2 2e-11 >seq3 Length=4610873 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| || |||||||||||||||||||||| |||| |||| |||| || Sbjct 3673438 ACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCG 3673497 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || ||||| || || | ||||| || || ||||| | ||||||||| || Sbjct 3673498 AGCTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGGGATACCCTCCTTATCTTGG 3673557 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | ||||| ||| || || | ||||| |||||| Sbjct 3673558 ATCTTTGACTTGACATTGTCGATTGTGTCCGATGACTCAACTTCTAATGTAATAGTCTTG 3673617 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || |||||||| |||||||||||||| Sbjct 3673618 CCAGTAAGAGTCTTGACAAAGATTTGCAT 3673646 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 ||||| |||||||||||||||||||||||||| || ||| | || || || || Sbjct 3673216 TGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCAAGCTGC 3673275 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || || || || || | || || ||||| ||||| | ||||||||| ||| ||| || Sbjct 3673276 TTACCAGCAAAGATAAGACGTTGCTGGTCAGGAGGAATACCCTCCTTATCCTGAATCTTC 3673335 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | | || | ||| ||||||| || ||||||||||| || Sbjct 3673336 GACTTGACGTTGTCGATGGTATCAGAAGACTCAACCTCCAATGTGATCGTCTTGCCGGTG 3673395 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || || || ||||| Sbjct 3673396 AGGGTCTTGACGAAAATCTGCAT 3673418 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||||||||||||||||||||||| || || ||| | || || || || Sbjct 3673899 GTGGAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCCTCGAGCTG 3673958 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| |||| ||||| ||||| || || | |||||||||||| ||| || Sbjct 3673959 CTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTT 3674018 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||| ||||| | |||||| |||||||| || Sbjct 3674019 GGACTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCGAGGGTAATGGTCTTGCCGGT 3674078 >seq7 Length=1200748 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| |||||||||||| || ||| | || || || || Sbjct 1041542 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTG 1041483 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| |||| ||||| ||||| || || | ||||||||| ||| || || Sbjct 1041482 CTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTATCCTGGATCTT 1041423 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||||||||| | ||| |||||||| ||||| Sbjct 1041422 GGACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTTCCCGT 1041363 Query 45313 CAGAGTCTTCACAAAGATTTGCATGTTGCCTCAA 45346 || ||||| || || || ||||| |||||| || Sbjct 1041362 AAGGGTCTTGACGAAAATCTGCATCTTGCCTGAA 1041329 >seq1 Length=8525130 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 ||||||| |||||||||||| || ||| | || || || || || || ||||| | Sbjct 1348138 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 1348079 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 ||| ||||| ||||| || || | |||||||| ||| || || ||| || Sbjct 1348078 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 1348019 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | | ||||| ||| ||||| | |||||| ||||| |||||||| |||||||| | Sbjct 1348018 CGATGGTGTCCGAGGACTCGACCTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTCACGA 1347959 Query 45327 A 45327 | Sbjct 1347958 A 1347958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075074810546