Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 >seq1 Length=8525130 Score = 96.9 bits (106), Expect = 3e-15 Identities = 332/513 (65%), Gaps = 11/513 (2%) Strand=Plus/Minus Query 14219 TGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCT 14278 ||||| ||||| || | | || || ||||| || || || | || ||||| | || Sbjct 3939552 TGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACCG 3939493 Query 14279 CGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCA 14338 || || || | ||| || || | || || | || || ||||| || ||||| || ||| Sbjct 3939492 CGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAGATACCCTCGACGGCA 3939433 Query 14339 GCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCC 14398 ||||| || | | || | |||| | | || |||| || ||||| || ||| Sbjct 3939432 GCAAAGGCAACGAGACGCTGAGCAAAGGTAGAGTTCTTGTCAGAGATCCACTTCAGGGCC 3939373 Query 14399 CATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA--ATGTTCCT 14456 || || | || || ||| | || || ||||| || || || | |||| | Sbjct 3939372 CAGTCGGCCTTCTTGCGGATACAGGGAATGGTCTCAATGGCGTTGAAGAGGTATGTGCG- 3939314 Query 14457 TCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTAT 14514 || ||| | ||||| ||| ||||||||||| | | || | |||||||| || Sbjct 3939313 -CTGGGTAGGCTCCTTGAC--GTAGGTATCAATAAGCAGGGAGTATGTCTCAGAGTGGAT 3939257 Query 14515 GTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGA 14574 ||| ||||| ||||| ||||| || || || | | | || | || ||||| Sbjct 3939256 GTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGACCCTCGGGAATCTGGACCTCGTT 3939197 Query 14575 GTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAA 14634 | | || | ||| | || || ||||| ||||| ||| || ||||| || || | Sbjct 3939196 GGAGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCAGAGGCGGCAAAGAAGGCAAG 3939137 Query 14635 TATGTTTTTAATAAAGTATTGCTCTTCATTGCTGA---GTTTTTTCCAATCGGCTAAATC 14691 |||| || ||||||| ||| |||| | ||| | || ||||||||| | ||| Sbjct 3939136 AATGTGGGAGATGAAGTATTTCTCGTCATCGTTGAGACGGTTGTTCCAATCGTGCAGATC 3939077 Query 14692 CTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14724 ||| |||||||| | ||| || ||||||| || Sbjct 3939076 CTTGGAAAGATCGATTTCTTCGGCTGTCCAGAA 3939044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345443237680