Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1 291 7e-74 seq3 104 2e-17 seq7 84.2 2e-11 >seq1 Length=8525130 Score = 291 bits (322), Expect = 7e-74 Identities = 635/948 (67%), Gaps = 2/948 (0%) Strand=Plus/Plus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 || ||||| ||||| || || ||||| || || |||||| | ||| || || || Sbjct 556629 GAAGCAAGGTTGCAGACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCAG 556688 Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146 || ||| | || || ||||| || |||||||||| || || ||||| ||| Sbjct 556689 AGGTTGGAGCTGCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCC 556748 Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206 |||||||||||| | || | || |||||| ||| | ||| | ||| || ||| | Sbjct 556749 TTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGCGTACCAAAGC 556808 Query 23207 GTCTGAGCGTGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGC 23265 ||||||| | | ||| || | | ||| || |||||||||| | ||||| || Sbjct 556809 TTCTGAGCCTTGA-TGGTCTTGCGGCCACGGCCCTCAGCCTCGTACTTCTCGTACAGGGC 556867 Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325 || ||||| ||||||| || ||||| ||||| || | | | || |||||||| | Sbjct 556868 CTCGAATTCCTCACCGTAGCAATCGGCAAGGCCAGGGCACTCGTTGGGGCACATGAGGGT 556927 Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385 |||| | || || ||||| || |||| |||||||| || ||||| ||||| ||| Sbjct 556928 CCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAA 556987 Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445 || || ||||| || || || || || || ||||| | || | || || || Sbjct 556988 GAGATCACGGGCACGGACTTCTTCCTTACCATGATTCTTGCGAAGGTCAAGGAACTCAAA 557047 Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505 || || || ||||| ||||| ||||| | ||| || || || || | ||| || || || Sbjct 557048 GACATCTGCGTGCCAGGGCTCAAGGTAGATGGCGAAGGCACCGGGACGCTTGTTACCACC 557107 Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 || |||||||| ||||| ||||||||| | || | | ||| || | || ||||||||| Sbjct 557108 TTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACACGCAACATGGGGATGACACCGTTGGA 557167 Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625 | ||| || || | || ||| | || || | | ||| ||| || ||| Sbjct 557168 GGTACCGTTGGTACCAGCGATGTAAGAGCCTGTGGCACGGATGCGGTGGGCGTTGAGACC 557227 Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685 ||||| || || || || ||||| || || || || || ||||| || ||||| Sbjct 557228 AATGCCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTATCGTAAATACCCTC 557287 Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745 ||||| ||||| || | | |||||||| || ||||| | || | ||| ||| | Sbjct 557288 AATGCTATCCTCCTTCATGTCAACCAAGAAGCAGGAAGAAAGCTGGCACTGGGGTGTACC 557347 Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805 ||| ||| || || ||| ||| || || ||| | || ||||| || ||||| || Sbjct 557348 GGCGTTGAAGAGGGTAGGGGAGGCATGGGTGAAGAACTTGTTAGACATGAGGTTGTAGGT 557407 Query 23806 GTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTA 23865 |||| | || |||| || || ||||||| ||||| | ||| ||||||| Sbjct 557408 CTCGAGAACACGCTCGATGTTGTCACCCCAAATACCGACAGCGACTCTCATGATCATGTG 557467 Query 23866 TTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTT 23925 || || | |||||| | ||||| ||| |||| ||| ||||| || | | || || Sbjct 557468 CTGGGGACGCTCGACGATCTTGCCGTCAATCTTGAGCAGGTATGAGCGCTCAAGAGTCTT 557527 Query 23926 AAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 || || || || | ||||| |||||||| |||| || ||||| || Sbjct 557528 GAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCGTAGACAATGGCAGA 557575 Score = 196 bits (216), Expect = 4e-45 Identities = 577/878 (66%), Gaps = 31/878 (4%) Strand=Plus/Plus Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 || || ||| | |||||||| ||||| || || || || ||||| | ||||||| | || Sbjct 3939008 GAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACAGCCGAAGAAATCGAT 3939067 Query 57627 CTGTCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGA-GAGAAAT--TTT 57680 || || ||||||||| ||||||| | || |||| || ||| ||||||| || Sbjct 3939068 CTTTCCAAGGATCTGCACGATTGGAACAACCGTCTCAACGA---TGACGAGAAATACTTC 3939124 Query 57681 ATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTC 57740 || ||| | | || || || ||||| || || ||||||||||||||||| | || Sbjct 3939125 ATCTCCCACATTCTTGCCTTCTTTGCCGCCTCTGACGGTATTGTTAACGAGAACCTTCTC 3939184 Query 57741 GAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTG 57800 || | || || | || || || | | |||| | ||||| ||||| || || | Sbjct 3939185 GAGCGCTTCTCCAACGAGGTCCAGATTCCCGAGGGTCGCTGCTTCTACGGTTTCCAGATC 3939244 Query 57801 GCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA- 57859 || || ||| | || || || | || || || || || ||||| ||||| ||||| Sbjct 3939245 ATGATGGAGAACATCCACTCTGAGACATACTCCCTGCTTATTGATACCTACGTCAAGGAG 3939304 Query 57860 -CAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGA 57918 | || | | | | || || |||||||| || || || || ||| ||| ||||| Sbjct 3939305 CCTACCCAGCGCA-CATAC-CTCTTCAACGCCATTGAGACCATTCCCTGTATCCGCAAGA 3939362 Query 57919 AGGCAGAGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974 |||| || ||| | | || ||||| | ||| | | || || || || | Sbjct 3939363 AGGCCGACTGGGCCCTGAAGTGGATCTCTGACAAGAACT----CTACCTTTGCTCAGCGT 3939418 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 || | || || || |||||||| ||||| ||||| || || |||||| | || || Sbjct 3939419 CTCGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCCATCTTC 3939478 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| | ||||| ||||| || |||||||| ||||| || ||||||| | || || || Sbjct 3939479 TGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGT 3939538 Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC-- 58152 ||||||||||| || || || ||||| ||||| || |||| ||| |||| || | Sbjct 3939539 GACGAGGGTCTTCACACCGACTTTGCCTGCCTTCTGCACTCCCAC---CTCAACAACCGT 3939595 Query 58153 -CGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTT 58211 | | ||| ||| | ||| ||||| || || ||| | || || | ||||| Sbjct 3939596 GCCAGCAAGGAGGTCATTGCCGGCATCATCACTGACGCTGTCACCATTGAGCAGGAGTTC 3939655 Query 58212 GTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTAC 58271 | ||||| || || || || ||||||| |||||| | | ||| ||||| Sbjct 3939656 CTTACCGAGGCTCTTCCTTGCGCTCTGCTCGGCATGAACGCCAACCTCATGAAGCAGTAC 3939715 Query 58272 ATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGA--GAGCGTCATTACAACA 58329 |||||||| || || || | || | ||| || | | | ||| |||||| Sbjct 3939716 ATTGAGTTCGTCGCTGATCGTCTCCTCGTCG--CTCTTGGCAACGAGAAGATTTACAAGT 3939773 Query 58330 CGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCG 58389 | | || || || || || ||| | ||||| || | |||||||| ||||| |||| Sbjct 3939774 CCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCG 3939833 Query 58390 aaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427 | || ||| |||| || || || ||| || ||| Sbjct 3939834 AGAAGCGTGTTGGCGAGTACCAGAAGGCCGGTGTCATG 3939871 Score = 113 bits (124), Expect = 4e-20 Identities = 370/570 (65%), Gaps = 9/570 (2%) Strand=Plus/Plus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| || || ||||| |||| || || | | ||| || || || |||||||| Sbjct 555707 CTGGTCGACGGTGAACTGAATGGGAGCGGCAGCAGCCTGGGTACGGAGGTAGTACATGCC 555766 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 ||||| ||||| | |||||| || || || || || | || || | || Sbjct 555767 GGTCTTGAGACCGAGCTTCCAACCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGTGGG 555826 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | ||||| | || || |||||| ||| ||||| || || || || ||||| | Sbjct 555827 CTCACGCATGTGGATGTTCAAGGACTGAGACTGGTCGATGAAGGCACCACGGTCGGCAGA 555886 Query 22285 CATATTTATCAATGTA-CGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 ||| | | ||| | ||| || || ||||| || |||||||| || | |||| | Sbjct 555887 CATCTGGA-CAACCTGGCGCTGGGAAATCTCCCAAACAGTCTTGTAAAGGGCCTTGATGT 555945 Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403 | || || ||| |||| | || ||||| | ||||| || || | Sbjct 555946 CGGCAGGGATGTTGGGGATGTTCTGAATAGATCCGTTCTCAGCAATGATACGGTTCTTCA 556005 Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463 | | ||| |||||| || ||| || | ||| |||| || |||| || || | Sbjct 556006 TGGCATCAGACCACAAGCCCATGTCGACAAGATCCTTGAGCAACCAGGGGTTAACAACCT 556065 Query 22464 GAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523 | ||||| || | |||||| ||||| |||||||||||||| ||| | || ||||| | | Sbjct 556066 GGAACTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGAAGTGTAGGGCTCGAAGCACT 556125 Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583 ||||||| || || ||||| | ||| || || || ||||| || || | || | |||| Sbjct 556126 CATTGTTGCCAAGAATCTGCGAGGTAGATGCAGTAGGCATGGGAGCAAGCAACAAAGAGT 556185 Query 22584 TTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGA 22641 | | | ||||||| |||| | | |||||| | ||| ||||| || ||| Sbjct 556186 TGCGGATACCGTGCTCCTTGACCTGCT--CCTTGAGGCTATCCCACTCCCAGAGGTCGCT 556243 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTG 22671 ||| | ||||| |||||| ||| |||| Sbjct 556244 GGGCTTGACATT---CCACATGTCGAATTG 556270 >seq3 Length=4610873 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| || || || || ||| |||| ||||| | ||| Sbjct 3673874 ATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATTACCCTCGAGGTTGAGTCTTCC 3673815 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | ||||| || || ||||||||| ||| | || || |||||| Sbjct 3673814 GACACTATTGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 3673755 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || || ||||| ||| | ||||| || | ||| || ||| Sbjct 3673754 CAGCGCCTGATTTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTTTCCGACTACAAC 3673695 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || ||||| || |||||||| || || Sbjct 3673694 ATCCAGAAGGAATCTACCCTTCATCTCGTTCT 3673663 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || |||||||| || ||||| || || || | || ||||| | || Sbjct 3673646 ATGCAAATCTTTGTCAAGACTCTTACTGGCAAGACTATTACATTAGAAGTTGAGTCATCG 3673587 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || ||| | || ||||| || | || || || || Sbjct 3673586 GACACAATCGACAATGTCAAGTCAAAGA-TCCAAGATAAGGAGGGTATCCCTCCTGATCA 3673528 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || || || || ||| | || ||| | ||| ||||||| || || Sbjct 3673527 GCAGCGTCTTATCTTTGCCGGTAAGCAGCTCGAGGACGGTCGCACTCTGAGCGACTACAA 3673468 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| || || || ||||| || |||| || Sbjct 3673467 CATTCAGAAGGAGTCTACTCTGCACTTGGTGCT 3673435 >seq7 Length=1200748 Score = 84.2 bits (92), Expect = 2e-11 Identities = 164/242 (68%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| || || || || ||||||||| | || || || | Sbjct 1041336 AAGATGCAGATTTTCGTCAAGACCCTTACGGGAAAGACGATCACCCTTGAGGTGGAGTCT 1041395 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| | || | ||||| | || ||| ||||| || | || || ||| Sbjct 1041396 TCCGACACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCCCCTGAC 1041455 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||||||||| ||| | || || || | ||| || Sbjct 1041456 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTAC 1041515 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAG 31425 ||||| || || || || ||||| || || || || | ||| | || ||| ||||| Sbjct 1041516 AACATCCAGAAGGAGTCCACTCTCCACCTTGTCCTCCGCCTGCGTGGTGGTGGCAAGAAG 1041575 Query 31426 CG 31427 || Sbjct 1041576 CG 1041577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766255125920