Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 4e-24
>seq1
Length=8525130
Score = 127 bits (140), Expect = 4e-24
Identities = 120/153 (78%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|||||||||||||| || || || |||||||| |||||| || || ||||| ||||||
Sbjct 3939422 GTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCCATCTTCTGG 3939481
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| | ||| | |||| ||||| |||| |||||| ||| |||| ||| | |||
Sbjct 3939482 CTCAAGAAGCGCGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGAC 3939541
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTG 102070
|| |||||||| ||||||||| ||| | |||
Sbjct 3939542 GAGGGTCTTCACACCGACTTTGCCTGCCTTCTG 3939574
Score = 95.1 bits (104), Expect = 2e-14
Identities = 137/192 (71%), Gaps = 6/192 (3%)
Strand=Plus/Plus
Query 94398 GCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAG 94457
||| |||||||| || |||||||||| |||| || || || || | | |||| |||
Sbjct 556838 GCCCTCAGCCTCGTACTTCTCGTACAGGGCCTCGAATTCCTCACCGTAGCAATCGGCAAG 556897
Query 94458 GCCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---ACTCTCTC 94514
|||||||||||||| ||||||||| |||| ||| || || |||| || | ||
Sbjct 556898 GCCAGGGCACTCGTTGGGGCACATGAGGGTCCA---CTCTCCGTTCTTCTCAACACGCTT 556954
Query 94515 CATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATCTTCATT 94574
|||||| ||||| | | ||||| ||| |||| ||||| | | | | ||||| ||
Sbjct 556955 CATGAAAAGATCGGGAATCCAGAGAGCAAGGAAGAGATCACGGGCACGGACTTCTTCCTT 557014
Query 94575 ACCGGCATTCTT 94586
||| ||||||
Sbjct 557015 ACCATGATTCTT 557026
Score = 87.8 bits (96), Expect = 4e-12
Identities = 170/251 (68%), Gaps = 0/251 (0%)
Strand=Plus/Plus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
|| ||||| |||||||||| || || ||| || ||||| |||||||||||||||
Sbjct 557232 CCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTATCGTAAATACCCTCAATG 557291
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911
||||| || | | | | | | |||||| || ||||| ||| | ||| ||
Sbjct 557292 CTATCCTCCTTCATGTCAACCAAGAAGCAGGAAGAAAGCTGGCACTGGGGTGTACCGGCG 557351
Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971
|| || || || ||||| |||||||| || | | | |||||||| | || || ||
Sbjct 557352 TTGAAGAGGGTAGGGGAGGCATGGGTGAAGAACTTGTTAGACATGAGGTTGTAGGTCTCG 557411
Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031
| ||| | ||||| || ||| |||||||| || | ||| ||||||| |||
Sbjct 557412 AGAACACGCTCGATGTTGTCACCCCAAATACCGACAGCGACTCTCATGATCATGTGCTGG 557471
Query 95032 GGGCGCTCAAC 95042
|| ||||| ||
Sbjct 557472 GGACGCTCGAC 557482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583670344830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |