Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1 185 1e-41
>seq1
Length=8525130
Score = 185 bits (204), Expect = 1e-41
Identities = 395/587 (67%), Gaps = 6/587 (1%)
Strand=Plus/Minus
Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217
|| || || ||| ||| ||||||||||| | | || | |||||||| || || ||
Sbjct 3939567 CAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 3939508
Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277
|||||||| || || ||||| || ||||| || ||||| ||||| | ||||| |||||
Sbjct 3939507 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAG 3939448
Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGT 36334
|| || || || || |||||||||| || | || || | | | |||||
Sbjct 3939447 ATACCCTCGACGGCAGCAAAGGCAACGAGACGCTGAGCAAAGGTAGAGTTCTTGTCAGAG 3939388
Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394
|||||||| | ||||| ||||||||||| | ||| || || ||||| || || ||
Sbjct 3939387 ATCCACTTCAGGGCCCAGTCGGCCTTCTTGCGGATACAGGGAATGGTCTCAATGGCGTTG 3939328
Query 36395 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 36454
||||| || | | || || || || || |||||||| | || || |
Sbjct 3939327 AAGAGGTATGTGCGCTGGGTAGGCTCCTTGACGTAGGTATCAATAAGCAGGGAGTATGTC 3939268
Query 36455 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 36514
|| || || ||||| || || || || || |||||||| || | | |||||| ||||
Sbjct 3939267 TCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGACCCTCGGGAATC 3939208
Query 36515 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 36574
|| || || | | || || || | || || || || || |||||| ||| |||
Sbjct 3939207 TGGACCTCGTTGGAGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCAGAGGCGGCA 3939148
Query 36575 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--TTGGTGTTA-GTTTATTCCAA 36631
|| || || | | || || || ||||| |||| | | || | | || ||||||
Sbjct 3939147 AAGAAGGCAAGAATGTGGGAGATGAAGTATTTCTCGTCATCGTTGAGACGGTTGTTCCAA 3939088
Query 36632 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 36691
|| | | ||| || || | ||| | |||||| ||||||| ||||| ||||| |||||
Sbjct 3939087 TCGTGCAGATCCTTGGAAAGATCGATTTCTTCGGCTGTCCAGAATGAGGCCTCGGCCTTC 3939028
Query 36692 TTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738
|| ||||| | |||||| || || || | || || || | ||| ||
Sbjct 3939027 TTGTACATCTGCCAGATCTCGTGGTACTTGATGGGGAAGAGAACGAA 3938981
Score = 145 bits (160), Expect = 1e-29
Identities = 447/687 (65%), Gaps = 16/687 (2%)
Strand=Plus/Plus
Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071
||||| || || | || ||||| | | ||||||||||| | || || || |||||
Sbjct 556899 CCAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATG 556958
Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131
|| ||||| |||||||| ||||| | || | ||| | || | ||| || || ||
Sbjct 556959 AAAAGATCGGGAATCCAGAGAGCAAGGAAGAGATCACGGGCACGGACTTCTTCCTTACCA 557018
Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191
|||||| ||| || |||||| | | | ||| ||||| || || | ||| |||
Sbjct 557019 TGATTCTTGCGAAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATG 557078
Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251
|| | | || || || ||||| || || || || | ||| | |||||||| || |
Sbjct 557079 GCGAAGGCACCGGGACGCTTGTTACCACCTTGGTCGACGTAGCGGGCGGTGTTGTTGAAG 557138
Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311
|| | |||||| || || | ||| ||||| ||||| ||||| || | ||| || ||
Sbjct 557139 ACACGCAACATGGGGATGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCT 557198
Query 66312 CTTGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 66369
| ||||| || | ||| ||||| || || || ||||| || ||||| | |
Sbjct 557199 GTGGCACGGATGCGGTGGGCGTTG--AGACCAATGCCACCAGCCATCTTGGAGATCATGG 557256
Query 66370 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 66429
| || || | ||||| || || ||||| || ||||| ||| |||||| || | |
Sbjct 557257 CACAGGTCTTGAGGGTATCGTAAATACCCTCAATGCTATCCTCCTTCATGTCAACCAAGA 557316
Query 66430 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 66489
| ||| ||| | ||| | || || || || || | |||||| || || || |
Sbjct 557317 AGCAGGAAGAAAGCTGGCACTGGGGTGTACCGGCGTTGAAGAGGGTAGGGGAGGCATGGG 557376
Query 66490 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATA----GCT-GA-GTCTATATCCC 66543
| || | || | ||| | || ||||| ||||| | | ||| || || | |||
Sbjct 557377 TGAAGAACTTGTTAGACATGAGGTTGTAGGTCTCGAGAACACGCTCGATGTTGTCACCCC 557436
Query 66544 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 66603
| ||| || || ||||| | ||| | ||||||||| || | || |||||||||
Sbjct 557437 A------AATACCGACAGCGACTCTCATGATCATGTGCTGGGGACGCTCGACGATCTTGC 557490
Query 66604 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 66663
|| || || | || ||| || || | ||| || || || || || | ||| |
Sbjct 557491 CGTCAATCTTGAGCAGGTATGAGCGCTCAAGAGTCTTGAAGCCGAAGTACTGGTAGTTGA 557550
Query 66664 AGTCTCGTTCGTAAATAATAACCGAGT 66690
|||| || ||||| | ||| | ||||
Sbjct 557551 AGTCACGGTCGTAGACAATGGCAGAGT 557577
Score = 96.9 bits (106), Expect = 5e-15
Identities = 308/477 (65%), Gaps = 3/477 (1%)
Strand=Plus/Plus
Query 64827 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 64886
|||| ||| | ||||| ||||||||||||| || | | ||||| || ||||||||
Sbjct 555705 TCCTGGTCGACGGTGAACTGAATGGGAGCGGCAGCAGCCTGGGTACGGAGGTAGTACATG 555764
Query 64887 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 64946
|| || || |||||||| |||| ||| || ||||| || || | ||| |
Sbjct 555765 CCGGTCTTGAGACCGAGCTTCCAACCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGTG 555824
Query 64947 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 65006
|| || || ||||| |||| || ||| || ||||||||||| || | ||| |||
Sbjct 555825 GGCTCACGCATGTGGATGTTCAAGGACTGAGACTGGTCGATGAAGGCACCACGGTCGGCA 555884
Query 65007 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 65066
| ||| | | | | || | ||| ||||||| ||| || |||| ||| ||
Sbjct 555885 GACATCTGGACAACCTGGCGCTGGGAAATCTCCCAAACAGTCTTGTAAAGGGCCTTGATG 555944
Query 65067 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 65123
|| | || | ||| | | |||||||| ||||| || || || || | |||||
Sbjct 555945 TCGGCAGGGATGTTGGGGATGTTCTGAATAGATCCGTTCTCAGCAATGATACGGTTCTTC 556004
Query 65124 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 65183
|| ||||| ||| || | ||| | | | | || | || ||||| ||
Sbjct 556005 ATGGCATCAGACCACAAGCCCATGTCGACAAGATCCTTGAGCAACCAGGGGTTAACAACC 556064
Query 65184 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 65243
|| || || |||| ||| || | || |||||| || || || || || | ||
Sbjct 556065 TGGAACTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGAAGTGTAGGGCTCGAAGCAC 556124
Query 65244 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300
||||| || || | ||| || | || |||||||| ||||| || || | ||| |||
Sbjct 556125 TCATTGTTGCCAAGAATCTGCGAGGTAGATGCAGTAGGCATGGGAGCAAGCAACAAA 556181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172586093840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |