Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1 208 1e-48
>seq1
Length=8525130
Score = 208 bits (230), Expect = 1e-48
Identities = 400/587 (68%), Gaps = 6/587 (1%)
Strand=Plus/Minus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| || || ||| ||| ||||||||||| | | || || |||||||| || || ||
Sbjct 3939567 CAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 3939508
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|||||||| || || ||||| || ||||| || ||||| ||||| | ||||| ||||||
Sbjct 3939507 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAG 3939448
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG---CTGTCATGT 50136
|| || || || || ||||||||||| || | || || | | | | |||||
Sbjct 3939447 ATACCCTCGACGGCAGCAAAGGCAACGAGACGCTGAGCAAAGGTAGAGTTCTTGTCAGAG 3939388
Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196
|||||||| | ||||| ||||||||||| | ||| || || || || ||||| ||
Sbjct 3939387 ATCCACTTCAGGGCCCAGTCGGCCTTCTTGCGGATACAGGGAATGGTCTCAATGGCGTTG 3939328
Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256
||||| || | | || || || || || ||||| || | || || |
Sbjct 3939327 AAGAGGTATGTGCGCTGGGTAGGCTCCTTGACGTAGGTATCAATAAGCAGGGAGTATGTC 3939268
Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316
|| || || ||||| || || ||||| || |||||||| || | | |||||| ||||
Sbjct 3939267 TCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGACCCTCGGGAATC 3939208
Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376
|| || || | | || || || | || || || || || |||||| ||| |||
Sbjct 3939207 TGGACCTCGTTGGAGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCAGAGGCGGCA 3939148
Query 50377 AAAAACGCCAATACATGTTTTATAAAATGTTTTTCGT--TGGGTGTTA-GTTTATTCCAA 50433
|| || || | | || || || | ||| |||| | | || | | || ||||||
Sbjct 3939147 AAGAAGGCAAGAATGTGGGAGATGAAGTATTTCTCGTCATCGTTGAGACGGTTGTTCCAA 3939088
Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493
|| | | ||| || || | ||| | |||||| ||||||| ||||| ||||| |||||
Sbjct 3939087 TCGTGCAGATCCTTGGAAAGATCGATTTCTTCGGCTGTCCAGAATGAGGCCTCGGCCTTC 3939028
Query 50494 TTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540
|| ||||| | |||||| || || || | ||| ||||| | ||| ||
Sbjct 3939027 TTGTACATCTGCCAGATCTCGTGGTACTTGATGGGGAAGAGAACGAA 3938981
Score = 87.8 bits (96), Expect = 3e-12
Identities = 306/477 (64%), Gaps = 3/477 (1%)
Strand=Plus/Plus
Query 78706 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 78765
|||| ||| | ||||| ||||||||||||| || | | ||||| || ||||||||
Sbjct 555705 TCCTGGTCGACGGTGAACTGAATGGGAGCGGCAGCAGCCTGGGTACGGAGGTAGTACATG 555764
Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTC 78825
|| || || |||||||| |||| ||| ||| ||||| || || | ||| |
Sbjct 555765 CCGGTCTTGAGACCGAGCTTCCAACCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGTG 555824
Query 78826 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 78885
|| || || ||||| |||| || ||| || ||||||||||| || | ||| |||
Sbjct 555825 GGCTCACGCATGTGGATGTTCAAGGACTGAGACTGGTCGATGAAGGCACCACGGTCGGCA 555884
Query 78886 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 78945
| ||| | | | | || | ||| ||||||| ||| || |||| ||| ||
Sbjct 555885 GACATCTGGACAACCTGGCGCTGGGAAATCTCCCAAACAGTCTTGTAAAGGGCCTTGATG 555944
Query 78946 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 79002
|| | || | ||| | | |||||||| ||||| || || || || | |||||
Sbjct 555945 TCGGCAGGGATGTTGGGGATGTTCTGAATAGATCCGTTCTCAGCAATGATACGGTTCTTC 556004
Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062
|| | ||| ||| || | ||| | | | | || | || ||||| ||
Sbjct 556005 ATGGCATCAGACCACAAGCCCATGTCGACAAGATCCTTGAGCAACCAGGGGTTAACAACC 556064
Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122
|| || || |||| ||| || | || |||||| || || || || || | |
Sbjct 556065 TGGAACTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGAAGTGTAGGGCTCGAAGCAC 556124
Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179
||||| || || | ||| || | || ||||| || ||||| || || | ||| |||
Sbjct 556125 TCATTGTTGCCAAGAATCTGCGAGGTAGATGCAGTAGGCATGGGAGCAAGCAACAAA 556181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268566562640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |