Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=8525130 Score = 107 bits (118), Expect = 2e-18 Identities = 332/511 (65%), Gaps = 7/511 (1%) Strand=Plus/Minus Query 13887 TGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCT 13946 ||||| ||||| || | | || || ||||| || || || | || ||||| | || Sbjct 3939552 TGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACCG 3939493 Query 13947 CGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCA 14006 || || || | ||| || || | ||||| | || || ||||| || ||||| || ||| Sbjct 3939492 CGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAGATACCCTCGACGGCA 3939433 Query 14007 GCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCC 14066 ||||| || | | || | |||| | | || |||| || ||||| || ||| Sbjct 3939432 GCAAAGGCAACGAGACGCTGAGCAAAGGTAGAGTTCTTGTCAGAGATCCACTTCAGGGCC 3939373 Query 14067 CATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTC 14126 || || | || || ||| | || || ||||| || || || | ||| | Sbjct 3939372 CAGTCGGCCTTCTTGCGGATACAGGGAATGGTCTCAATGGCGTTGAAGAGGTATGTGCGC 3939313 Query 14127 TCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGT 14184 | ||| | ||||| ||| ||||||||||| | | || | |||||||| |||| Sbjct 3939312 TGGGTAGGCTCCTTGAC--GTAGGTATCAATAAGCAGGGAGTATGTCTCAGAGTGGATGT 3939255 Query 14185 TTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGT 14244 | ||||| ||||| ||||| || ||||| | | | || | || || || | Sbjct 3939254 TCTCCATCATGATCTGGAAACCGTAGAAGCAGCGACCCTCGGGAATCTGGACCTCGTTGG 3939195 Query 14245 AAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATA 14304 | || | ||| | || || ||||| ||||| ||| || ||||| || || | | Sbjct 3939194 AGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCAGAGGCGGCAAAGAAGGCAAGAA 3939135 Query 14305 TGTTTTTAATAAAGTATTGCTCTTCATTGTTGA---GTTTTTTCCAATCGGATAAATCCT 14361 ||| || ||||||| ||| |||| ||||| | || ||||||||| | ||||| Sbjct 3939134 TGTGGGAGATGAAGTATTTCTCGTCATCGTTGAGACGGTTGTTCCAATCGTGCAGATCCT 3939075 Query 14362 TAGAAAGATCTACTTCATCAACTGTCCAAAA 14392 | |||||||| | ||| || ||||||| || Sbjct 3939074 TGGAAAGATCGATTTCTTCGGCTGTCCAGAA 3939044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727844088400