Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 2e-18
>seq1
Length=8525130
Score = 107 bits (118), Expect = 2e-18
Identities = 332/511 (65%), Gaps = 7/511 (1%)
Strand=Plus/Minus
Query 13887 TGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCT 13946
||||| ||||| || | | || || ||||| || || || | || ||||| | ||
Sbjct 3939552 TGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACCG 3939493
Query 13947 CGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCA 14006
|| || || | ||| || || | ||||| | || || ||||| || ||||| || |||
Sbjct 3939492 CGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAGATACCCTCGACGGCA 3939433
Query 14007 GCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCC 14066
||||| || | | || | |||| | | || |||| || ||||| || |||
Sbjct 3939432 GCAAAGGCAACGAGACGCTGAGCAAAGGTAGAGTTCTTGTCAGAGATCCACTTCAGGGCC 3939373
Query 14067 CATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTC 14126
|| || | || || ||| | || || ||||| || || || | ||| |
Sbjct 3939372 CAGTCGGCCTTCTTGCGGATACAGGGAATGGTCTCAATGGCGTTGAAGAGGTATGTGCGC 3939313
Query 14127 TCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGT 14184
| ||| | ||||| ||| ||||||||||| | | || | |||||||| ||||
Sbjct 3939312 TGGGTAGGCTCCTTGAC--GTAGGTATCAATAAGCAGGGAGTATGTCTCAGAGTGGATGT 3939255
Query 14185 TTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGT 14244
| ||||| ||||| ||||| || ||||| | | | || | || || || |
Sbjct 3939254 TCTCCATCATGATCTGGAAACCGTAGAAGCAGCGACCCTCGGGAATCTGGACCTCGTTGG 3939195
Query 14245 AAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATA 14304
| || | ||| | || || ||||| ||||| ||| || ||||| || || | |
Sbjct 3939194 AGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCAGAGGCGGCAAAGAAGGCAAGAA 3939135
Query 14305 TGTTTTTAATAAAGTATTGCTCTTCATTGTTGA---GTTTTTTCCAATCGGATAAATCCT 14361
||| || ||||||| ||| |||| ||||| | || ||||||||| | |||||
Sbjct 3939134 TGTGGGAGATGAAGTATTTCTCGTCATCGTTGAGACGGTTGTTCCAATCGTGCAGATCCT 3939075
Query 14362 TAGAAAGATCTACTTCATCAACTGTCCAAAA 14392
| |||||||| | ||| || ||||||| ||
Sbjct 3939074 TGGAAAGATCGATTTCTTCGGCTGTCCAGAA 3939044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727844088400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |