Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq1 105 6e-18
>seq1
Length=8525130
Score = 105 bits (116), Expect = 6e-18
Identities = 334/513 (65%), Gaps = 11/513 (2%)
Strand=Plus/Minus
Query 13675 TGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCT 13734
||||| ||||| || | | || || ||||| || || || | || ||||| | ||
Sbjct 3939552 TGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACCG 3939493
Query 13735 CGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCA 13794
|| || || | ||| || || | || || | || || ||||| || ||||| || |||
Sbjct 3939492 CGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAGATACCCTCGACGGCA 3939433
Query 13795 GCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCC 13854
||||| || | || || | |||| | | || |||| || ||||| || |||
Sbjct 3939432 GCAAAGGCAACGAGACGCTGAGCAAAGGTAGAGTTCTTGTCAGAGATCCACTTCAGGGCC 3939373
Query 13855 CATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA--ATGTTCCT 13912
|| || | || || ||| | || || || || || ||||| | |||| |
Sbjct 3939372 CAGTCGGCCTTCTTGCGGATACAGGGAATGGTCTCAATGGCGTTGAAGAGGTATGTGCG- 3939314
Query 13913 TCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTAT 13970
|| ||| | ||||| ||| ||||||||||| | | || | |||||||| ||
Sbjct 3939313 -CTGGGTAGGCTCCTTGAC--GTAGGTATCAATAAGCAGGGAGTATGTCTCAGAGTGGAT 3939257
Query 13971 GTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGA 14030
||| || || ||||| ||||| || || || | | | || | || |||||
Sbjct 3939256 GTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGACCCTCGGGAATCTGGACCTCGTT 3939197
Query 14031 GTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAA 14090
| | || | || | ||| || ||||||||||| ||| || ||||| || || |
Sbjct 3939196 GGAGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCAGAGGCGGCAAAGAAGGCAAG 3939137
Query 14091 TATGTTTTTAATAAAGTATTGCTCTTCATTGTTGA---GTTTTTTCCAATCGGCTAAATC 14147
|||| || ||||||| ||| |||| ||||| | || ||||||||| | |||
Sbjct 3939136 AATGTGGGAGATGAAGTATTTCTCGTCATCGTTGAGACGGTTGTTCCAATCGTGCAGATC 3939077
Query 14148 CTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180
||| |||||||| | ||| || ||||||| ||
Sbjct 3939076 CTTGGAAAGATCGATTTCTTCGGCTGTCCAGAA 3939044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588644458640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |