Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1 311 1e-79
seq4 87.8 3e-12
>seq1
Length=8525130
Score = 311 bits (344), Expect = 1e-79
Identities = 608/887 (69%), Gaps = 31/887 (3%)
Strand=Plus/Plus
Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054
|| || ||||||| ||| || || || ||| | |||||||| ||||| ||||||| ||
Sbjct 3938987 CTCTTCCCCATCAAGTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCATTC 3939046
Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114
||||| | |||||| ||||||| |||||||| ||| |||||||| | | ||| | |
Sbjct 3939047 TGGACAGCCGAAGAAATCGATCTTTCCAAGGATCTGCACGATTGGAACAACCGTCTCAAC 3939106
Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174
|| ||| | | || || || |||||| | ||||||||||||| ||| || || ||
Sbjct 3939107 GATGACGAGAAATACTTCATCTCCCACATTCTTGCCTTCTTTGCCGCCTCTGACGGTATT 3939166
Query 125175 GTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TG 125233
|| ||||| || || | || ||||| | ||| | ||||| |||| |||| ||
Sbjct 3939167 GTTAACGAGAACCTTCTCGAGCGCTTCTCCAACGAGGTCCAGATTCCCGAGG-GTCGCTG 3939225
Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293
||| ||||| ||||| |||||||| |||||| | ||||| || | ||||| || ||
Sbjct 3939226 CTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCTGAGACATACTCCCTGCTTAT 3939285
Query 125294 TGACATGTACATTCGCGA---TCCGCAACGTAAACACATGCTCTTTAACGCAATCGACAC 125350
||| | ||| | || | | || || | | || ||||| ||||| || || ||
Sbjct 3939286 TGATACCTACGTCAAGGAGCCTACCCAGCGCACATAC---CTCTTCAACGCCATTGAGAC 3939342
Query 125351 GGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTC 125410
| || | ||| || || ||||| | |||| | ||||||| |||| | || ||
Sbjct 3939343 CATTCCCTGTATCCGCAAGAAGGCCGACTGGGCCCTGAAGTGGATCTCTGACAAGAACTC 3939402
Query 125411 TTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAG 125470
| | | || | | || || || || || ||||| ||||| |||||||| || |||
Sbjct 3939403 TACCTTTGCTCAGCGTCTCGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGTGC 3939462
Query 125471 TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAA 125530
||||| ||||||| ||||||||||||||||| ||||||||||| ||||| | ||
Sbjct 3939463 CTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTGACCTTCTCCAA 3939522
Query 125531 CGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTG-TTTCGCA 125589
|||| | || ||||| |||||||| || ||| ||||||||| || ||| || ||
Sbjct 3939523 CGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCCTTCTGCACTCCCA 3939582
Query 125590 ACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCAT---CAACATTGTAACCG 125646
| || | || ||| ||||| | | ||||||| | ||| | || |
Sbjct 3939583 CC--TCAACAACC---GTG-----CCAGCAAGG---AGGTCATTGCCGGCATCATCACTG 3939629
Query 125647 ATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCA 125706
| || || | || || || ||||| || ||||| | || || | || | ||||
Sbjct 3939630 ACGCTGTCACCATTGAGCAGGAGTTCCTTACCGAGGCTCTTCCTTGCGCTCTGCTCGGCA 3939689
Query 125707 TGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGT 125766
||||| ||| || ||| ||||||| ||||| || || |||||||| || ||
Sbjct 3939690 TGAACGCCAACCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCT---CGTCG 3939746
Query 125767 TGATTGGC--CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATAT 125823
||||| || ||||||||||| ||| || ||||| || |||||| | ||| |
Sbjct 3939747 CTCTTGGCAACGAGAAGATTTACAAGTCCACCAACCCCTTCGACTTCATGGAGAACATCT 3939806
Query 125824 CACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870
| || | || ||||||||||| ||||||||| || ||||||||
Sbjct 3939807 CCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTAC 3939853
Score = 143 bits (158), Expect = 4e-29
Identities = 305/449 (68%), Gaps = 10/449 (2%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
|| || || || || || || || || | ||| ||||| | || || |||||||| ||
Sbjct 557110 CAAGGTGGTAACAAGCGTCCCGGTGCCTTCGCCATCTACCTTGAGCCCTGGCACGCAGAT 557051
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| ||||| || | || | ||||| || ||| ||||| | || ||| | ||
Sbjct 557050 GTCTTTGAGTTCCTTGACCTTCGCAAGAATCATGGTAAGGAAGAAGTCCGTGCCCGTGAT 556991
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AACGACGGTGGC 97052
| || ||| |||||| | || ||| | ||||||||||| || || |||| |
Sbjct 556990 CTCTTCCTTGCTCTCTGGATTCCCGATCTTTTCATGAAGCGTGTTGAGAAGAACGGAG-- 556933
Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112
| |||| ||| ||||||||| || || || || || ||||||||| || || ||
Sbjct 556932 -AGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCCGATTGCTACGGTGAGGAA 556874
Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATAC-GTGAGACGAGTCGATGC 97171
|| |||||| |||| | |||||| |||||||| | | |||| | || | ||
Sbjct 556873 TTCGAGGCCCTGTACGAGAAGTACGAGGCTGAGGGCCGTGGCCGCAAGACCA-TCAAGGC 556815
Query 97172 ACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230
| |||| || ||| | |||||| | ||||||| |||||||| | || | ||| |
Sbjct 556814 TC-AGAAGCTTTGGTACGCCATCCTTGAGGCTCAGACCGAGACTGGTAACCCCTTCATGC 556756
Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290
|||||||||| | || ||||| |||||||| ||||||| |||||| |||
Sbjct 556755 TCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACTTGGGTACCATCCGCAGCT 556696
Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTAC 97319
|||| || ||||| || ||| | ||||||
Sbjct 556695 CCAACCTCTGCACTGAGATTATCGAGTAC 556667
>seq4
Length=2750940
Score = 87.8 bits (96), Expect = 3e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 127126 CGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGTCACAATGTCACAATACTCAAAGGGG 127185
|| ||||| | ||||| |||||| || || ||||| || || ||| ||||| ||||||
Sbjct 970694 CGGGGACCACGGAGAGACTTGTGGGTGGTGGTGGTGACGATATCAGCGTACTCGAAGGGG 970635
Query 127186 CCAGGAATGACTTTGCCCGCAATCAAGCCCGCAATGTGTGCAATATCGGCCATCAGCAAG 127245
| || ||||| | | | ||||| | || | |||||| || || ||| |||| || ||
Sbjct 970634 CTGGGGATGACCTGGGCGGCAATGAGACCAGAAATGTGAGCCATGTCGACCATGAGGTAG 970575
Query 127246 GAGCCGGCTGCATCGGCAATCTCTCG 127271
| |||| | | ||||||||||| ||
Sbjct 970574 GCGCCGACGGAGTCGGCAATCTCGCG 970549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058959155760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |