Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3 131 4e-25 >seq3 Length=4610873 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || |||||||| || ||||| ||||| | |||||| || || || || || Sbjct 3673450 GTAGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCGAGCTGCTTACCG 3673509 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| ||||||||||| || || || ||||| || ||||||| || Sbjct 3673510 GCAAAGATAAGACGCTGCTGATCAGGAGGGATACCCTCCTTATCTTGGATCTTTGACTTG 3673569 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | || || | || || |||| |||||||||||| |||||||| || Sbjct 3673570 ACATTGTCGATTGTGTCCGATGACTCAACTTCTAATGTAATAGTCTTGCCAGTAAGAGTC 3673629 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 3673630 TTGACAAAGATTTGCAT 3673646 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || |||||||| ||||| | || ||||| || || || |||||||| Sbjct 3673228 TCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAG 3673287 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | || || |||||||| || || || |||||||||||||| | || || || Sbjct 3673288 ATAAGACGTTGCTGGTCAGGAGGAATACCCTCCTTATCCTGAATCTTCGACTTGACGTTG 3673347 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | |||||| || || ||||| | ||| || ||||| || || || || || || Sbjct 3673348 TCGATGGTATCAGAAGACTCAACCTCCAATGTGATCGTCTTGCCGGTGAGGGTCTTGACG 3673407 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 3673408 AAAATCTGCAT 3673418 Score = 98.7 bits (108), Expect = 2e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || || ||||| || || | || || || || || || ||||| ||| Sbjct 3673912 TCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAA 3673971 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| || ||||| || ||||| || || ||||||||||| | || || || Sbjct 3673972 ATCAGGCGCTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 3674031 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 || | ||| ||| || || ||||| || ||||| ||||| || || Sbjct 3674032 TCAATGGTGTCGGAAGACTCAACCTCGAGGGTAATGGTCTTGCCGGT 3674078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398016440408