Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq3 131 4e-25
>seq3
Length=4610873
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || |||||||| || ||||| ||||| | |||||| || || || || ||
Sbjct 3673450 GTAGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCGAGCTGCTTACCG 3673509
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | ||| ||||||||||| || || || ||||| || ||||||| ||
Sbjct 3673510 GCAAAGATAAGACGCTGCTGATCAGGAGGGATACCCTCCTTATCTTGGATCTTTGACTTG 3673569
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | || || | || || |||| |||||||||||| |||||||| ||
Sbjct 3673570 ACATTGTCGATTGTGTCCGATGACTCAACTTCTAATGTAATAGTCTTGCCAGTAAGAGTC 3673629
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| || |||||
Sbjct 3673630 TTGACAAAGATTTGCAT 3673646
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| |||||||| || |||||||| ||||| | || ||||| || || || ||||||||
Sbjct 3673228 TCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAG 3673287
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | || || |||||||| || || || |||||||||||||| | || || ||
Sbjct 3673288 ATAAGACGTTGCTGGTCAGGAGGAATACCCTCCTTATCCTGAATCTTCGACTTGACGTTG 3673347
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | |||||| || || ||||| | ||| || ||||| || || || || || ||
Sbjct 3673348 TCGATGGTATCAGAAGACTCAACCTCCAATGTGATCGTCTTGCCGGTGAGGGTCTTGACG 3673407
Query 104549 AATATCTGCAT 104559
|| ||||||||
Sbjct 3673408 AAAATCTGCAT 3673418
Score = 98.7 bits (108), Expect = 2e-15
Identities = 122/167 (73%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| |||||||| || || ||||| || || | || || || || || || ||||| |||
Sbjct 3673912 TCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAA 3673971
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | ||| || ||||| || ||||| || || ||||||||||| | || || ||
Sbjct 3673972 ATCAGGCGCTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 3674031
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535
|| | ||| ||| || || ||||| || ||||| ||||| || ||
Sbjct 3674032 TCAATGGTGTCGGAAGACTCAACCTCGAGGGTAATGGTCTTGCCGGT 3674078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398016440408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |