Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2 174 2e-39
seq5 165 1e-36
>seq2
Length=6006343
Score = 174 bits (192), Expect = 2e-39
Identities = 205/275 (75%), Gaps = 2/275 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||| ||| |||| |||||| || ||||| || || ||||||||||| ||||
Sbjct 3238354 CGCTAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATCACCAAGCCCGCTA 3238412
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| |||||||||||||| ||||||||| | |||| || |||| || ||||
Sbjct 3238413 TCCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTGCCATGATCTACGAGGAGA 3238472
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
||| |||| | ||||||| || ||| |||| |||||| || || || |
Sbjct 3238473 CTCGCACTGTTCTCCGCTCCTTCCTCGAGGGCGTCATCCGTGATGCCGTCACATACACTG 3238532
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| ||||| || |||| | ||||| || | || || || |
Sbjct 3238533 AGCACGCCAAGCGCAAGACCGTCACATCGCTGGACGTTGTCTACGCTCTCAAGCGCCAGG 3238592
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
|||||| | || ||||| || ||||| | |||
Sbjct 3238593 GCCGTACCCTCTACGGTTTCGGTGGTTAAGCGTCT 3238627
>seq5
Length=2539488
Score = 165 bits (182), Expect = 1e-36
Identities = 201/269 (75%), Gaps = 4/269 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| ||| |||| |||||| || ||||| || || ||||||||||| |||||
Sbjct 1469403 GCTAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATCACCAAGCCCGCTAT 1469461
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| |||||||||||||| ||||||||| | |||| || |||| || ||||
Sbjct 1469462 CCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTGCCATGATCTACGAGGAGAC 1469521
Query 16552 TCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| |||| | | || ||||| || ||| |||| |||||| || ||| || |
Sbjct 1469522 CCGCACTGTTCT-CCGTTCTTTCCTTGAGGGCGTCATCCGTGATGCCGTCACCTACACTG 1469580
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| |||||||| | || | ||||| || | || || || |
Sbjct 1469581 AGCACGCCAAGCGCAAGACCGTCACCTCGCTCGACGTTGTCTACGCTCTCAAGCGCCAGG 1469640
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||||| | || ||||| || |||||
Sbjct 1469641 GCCGTACCCTCTACGGTTTCGGTGGTTAA 1469669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075176228018
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |