Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1 199 5e-46
>seq1
Length=8525130
Score = 199 bits (220), Expect = 5e-46
Identities = 398/587 (68%), Gaps = 6/587 (1%)
Strand=Plus/Minus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| || || ||| ||| ||||||||||| | | || || |||||||| || || ||
Sbjct 3939567 CAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 3939508
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|||||||| || || ||||| || ||||| || ||||| || || | ||||| ||||||
Sbjct 3939507 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAG 3939448
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33480
|| || || || ||||||||||||| || | || || | | | |||||
Sbjct 3939447 ATACCCTCGACGGCAGCAAAGGCAACGAGACGCTGAGCAAAGGTAGAGTTCTTGTCAGAG 3939388
Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540
|||||||| | ||||| ||||||||||| | ||| || || || || ||||| ||
Sbjct 3939387 ATCCACTTCAGGGCCCAGTCGGCCTTCTTGCGGATACAGGGAATGGTCTCAATGGCGTTG 3939328
Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600
||||| || | | || || || || || ||||| || | || || |
Sbjct 3939327 AAGAGGTATGTGCGCTGGGTAGGCTCCTTGACGTAGGTATCAATAAGCAGGGAGTATGTC 3939268
Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660
|| || || ||||| || || ||||| || |||||||| || | | |||||| ||||
Sbjct 3939267 TCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGACCCTCGGGAATC 3939208
Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720
|| || || | | || || || | || || || || || |||||| ||| |||
Sbjct 3939207 TGGACCTCGTTGGAGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCAGAGGCGGCA 3939148
Query 33721 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGTGTTA-GTTTATTCCAA 33777
|| || || | | || || || ||||| ||||| | || | | || ||||||
Sbjct 3939147 AAGAAGGCAAGAATGTGGGAGATGAAGTATTTCTCGTCATCGTTGAGACGGTTGTTCCAA 3939088
Query 33778 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33837
|| | | ||| || || | ||| | |||||| ||||||| ||||| ||||| |||||
Sbjct 3939087 TCGTGCAGATCCTTGGAAAGATCGATTTCTTCGGCTGTCCAGAATGAGGCCTCGGCCTTC 3939028
Query 33838 TTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884
|| ||||| | |||||| || | || | ||| ||||| | ||| ||
Sbjct 3939027 TTGTACATCTGCCAGATCTCGTGGTACTTGATGGGGAAGAGAACGAA 3938981
Score = 158 bits (174), Expect = 2e-33
Identities = 450/687 (66%), Gaps = 16/687 (2%)
Strand=Plus/Plus
Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227
||||| || || | || ||||| | | ||||||||||| | || || || |||||
Sbjct 556899 CCAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATG 556958
Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287
|| ||||| |||||||| ||||| | || ||||| | || | ||| || || ||
Sbjct 556959 AAAAGATCGGGAATCCAGAGAGCAAGGAAGAGATCACGGGCACGGACTTCTTCCTTACCA 557018
Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347
|||||| ||| || |||||| | | | ||| | ||||| || || | ||| |||
Sbjct 557019 TGATTCTTGCGAAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATG 557078
Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407
|| | | || || || ||||| || || || || | ||| | |||||||| || |
Sbjct 557079 GCGAAGGCACCGGGACGCTTGTTACCACCTTGGTCGACGTAGCGGGCGGTGTTGTTGAAG 557138
Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467
|| | |||||| || || | |||||| || |||| |||||||| | ||| || ||
Sbjct 557139 ACACGCAACATGGGGATGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCT 557198
Query 63468 CTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63525
||||||| || | ||| ||||| || || || ||||| || ||||| | |
Sbjct 557199 GTGGCACGGATGCGGTGGGCGTTG--AGACCAATGCCACCAGCCATCTTGGAGATCATGG 557256
Query 63526 CGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAA 63585
| || || | || || || |||||||| |||||||| || |||||| || | |
Sbjct 557257 CACAGGTCTTGAGGGTATCGTAAATACCCTCAATGCTATCCTCCTTCATGTCAACCAAGA 557316
Query 63586 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63645
| ||| ||| | ||| | || || || || || | |||||| || || || |
Sbjct 557317 AGCAGGAAGAAAGCTGGCACTGGGGTGTACCGGCGTTGAAGAGGGTAGGGGAGGCATGGG 557376
Query 63646 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATA----GCT-GA-GTCTATATCCC 63699
| || | || | ||| | || ||||| ||||| | | ||| || || | |||
Sbjct 557377 TGAAGAACTTGTTAGACATGAGGTTGTAGGTCTCGAGAACACGCTCGATGTTGTCACCCC 557436
Query 63700 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 63759
| ||| || || ||||| | ||| | ||||||||| || | || |||||||||
Sbjct 557437 A------AATACCGACAGCGACTCTCATGATCATGTGCTGGGGACGCTCGACGATCTTGC 557490
Query 63760 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 63819
|| || || | || ||| || || | ||| || || || || || | ||| |
Sbjct 557491 CGTCAATCTTGAGCAGGTATGAGCGCTCAAGAGTCTTGAAGCCGAAGTACTGGTAGTTGA 557550
Query 63820 AGTCTCGTTCGTAAATAATAACCGAGT 63846
|||| || ||||| | ||| | ||||
Sbjct 557551 AGTCACGGTCGTAGACAATGGCAGAGT 557577
Score = 96.9 bits (106), Expect = 4e-15
Identities = 308/477 (65%), Gaps = 3/477 (1%)
Strand=Plus/Plus
Query 61983 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62042
|||| ||| | ||||| ||||||||||||| || | | ||||| || ||||||||
Sbjct 555705 TCCTGGTCGACGGTGAACTGAATGGGAGCGGCAGCAGCCTGGGTACGGAGGTAGTACATG 555764
Query 62043 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 62102
|| || || |||||||| |||| ||| || ||||| || || | ||| |
Sbjct 555765 CCGGTCTTGAGACCGAGCTTCCAACCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGTG 555824
Query 62103 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62162
|| || || ||||| |||| || ||| || ||||||||||| || | ||| |||
Sbjct 555825 GGCTCACGCATGTGGATGTTCAAGGACTGAGACTGGTCGATGAAGGCACCACGGTCGGCA 555884
Query 62163 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62222
| ||| | | | | || | ||| ||||||| ||| || |||| ||| ||
Sbjct 555885 GACATCTGGACAACCTGGCGCTGGGAAATCTCCCAAACAGTCTTGTAAAGGGCCTTGATG 555944
Query 62223 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 62279
|| | || | ||| | | |||||||| ||||| || || || || | |||||
Sbjct 555945 TCGGCAGGGATGTTGGGGATGTTCTGAATAGATCCGTTCTCAGCAATGATACGGTTCTTC 556004
Query 62280 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 62339
|| ||||| ||| || | ||| | | | | || | || ||||| ||
Sbjct 556005 ATGGCATCAGACCACAAGCCCATGTCGACAAGATCCTTGAGCAACCAGGGGTTAACAACC 556064
Query 62340 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGAC 62399
|| || || |||| ||| || | || |||||| || || || || || | ||
Sbjct 556065 TGGAACTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGAAGTGTAGGGCTCGAAGCAC 556124
Query 62400 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456
||||| || || | ||| || | || |||||||| ||||| || || | ||| |||
Sbjct 556125 TCATTGTTGCCAAGAATCTGCGAGGTAGATGCAGTAGGCATGGGAGCAAGCAACAAA 556181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946997542160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |