Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1 340 5e-88
seq2 84.2 6e-11
>seq1
Length=8525130
Score = 340 bits (376), Expect = 5e-88
Identities = 1040/1583 (66%), Gaps = 36/1583 (2%)
Strand=Plus/Minus
Query 363595 CAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGAC 363654
||| | ||||| ||||| | | | |||||||| ||| ||| |||||||| | ||
Sbjct 557332 CAGCTTTCTTCCTGCTTCTTGGTTGACATGAAGGAGGATAGCATTGAGGGTATTTACGAT 557273
Query 363655 ACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCA 363713
|| || |||| ||||| | || ||||||| || || || |||||| | | || |||
Sbjct 557272 ACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGCATTGGTCTCAACGC-CCA 557214
Query 363714 CAATGTTCGTGC-ACAGAACAGTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTG 363771
| | ||||| |||| | |||||| ||| || || || ||| || || |
Sbjct 557213 CCGCATCCGTGCCACAGG-CTCTTACAT-CGCTGGTACCAACGGTACCTCCAACGGTGTC 557156
Query 363772 GTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAG 363831
| |||||| | ||||| || |||| || || | ||||||||||| ||||| |||
Sbjct 557155 ATCCCCATGTTGCGTGTCTTCAACAACACCGCCCGCTACGTCGACCAAGGTGGTAACAAG 557096
Query 363832 CGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTT 363891
|| || || || || || || || ||||| || || ||| | |||||||| |||
Sbjct 557095 CGTCCCGGTGCCTTCGCCATCTACCTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTT 557036
Query 363892 GAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTT 363951
|| || || || || || || || ||| | ||||| |||||||| ||| ||| ||
Sbjct 557035 GACCTTCGCAAGAATCATGGTAAGGAAGAAGTCCGTGCCCGTGATCTCTTCCTTGCTCTC 556976
Query 363952 TGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTG 364010
||| || | || | ||| |||||||| || ||| || || | ||| | ||| | ||
Sbjct 556975 TGGATTCCCGATCTTTTCATGAAGCGTGTTGAGA-AGAACGGAGAGTGGACCCTCATGTG 556917
Query 364011 CCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGA 364070
||| |||| || || || ||| ||||| | ||||| || | | || || |||||
Sbjct 556916 CCCCAACGAGTGCCCTGGCCTTGCCGATTGCTACGGTGAGGAATTCGAGGCCCTGTACGA 556857
Query 364071 AAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGC 364130
||||| || | ||||| | || ||||| || || |||||||| |||| ||
Sbjct 556856 GAAGTACGAGGCTGAGGGCCGTGGCCGCAAGACCATCAAGGCTCAGAAGCTTTGGTACGC 556797
Query 364131 CATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAA 364190
|||| | || | |||| ||||| || | |||| ||| | ||||| || |||||
Sbjct 556796 CATCCTTGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTCTACAAGGACCACTGCAA 556737
Query 364191 CCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGA 364249
||||||| ||||||| || || | ||||| | || |||| |||||| || || ||||
Sbjct 556736 CCGCAAGAGCAACCAGAAGAACTTGGGTACCA-TCCGCAGCTCCAACCTCTGCACTGAGA 556678
Query 364250 TTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTC 364309
|||| || ||| || || || ||| || || || |||||||| || | || ||||
Sbjct 556677 TTATCGAGTACTGTGCCCCTGATGAGGTCGCTGTCTGCAACCTTGCTTCCCTTGCTCTTC 556618
Query 364310 CGGCGTTTGT------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCT 364363
| || || || || || || | | |||| | || | || |||| || |||
Sbjct 556617 CTGCTTTCGTTGACTACAACGAGGGCAAGTATGACTTCAAGAAGCTCCATGAAGTCACCC 556558
Query 364364 ATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAG 364423
| || | |||| | ||||| | || ||| || | || || ||| || |
Sbjct 556557 AGGTTGTTGTCCGCAACTTGAACAAGATCATTGACGTCAACCACTACCCCGTTCAGGAGG 556498
Query 364424 C-CG----AGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGC 364478
| || ||| || |||||||| || || |||||| | ||||| ||||| || ||
Sbjct 556497 CTCGTAACAGC-----AACATGCGTCACCGTCCCATTGGTGTCGGTGTTCAGGGTCTTGC 556443
Query 364479 TGACGTTTTTATGATGCTCAA--GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAAT 364536
||||| || | |||| | | | || || || ||||| ||||||| || ||
Sbjct 556442 TGACGCCTTCCT--CGCTCTACGTCTCCCCTTCGAGTCCCCTGAGGCTCGTGAGCTGAAC 556385
Query 364537 AAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAA 364595
||| |||| || || || || || || || | ||||| || |||| | ||||| ||
Sbjct 556384 AAGCAGATTTTCGAGACCATCTACCACGCTGCCGTCACTGCCTC-TGTGCAGTTGGCCAA 556326
Query 364596 AACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTT 364655
|||| |||||||||| |||| || || || |||| | |||| ||
Sbjct 556325 GGAAGAGGGTCCCTACTCTACTTTCAAGGGCTCTCCCGCCTCTGAGGGTATCCTCCAATT 556266
Query 364656 TGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACG 364714
|| | |||||||||| ||| | || ||| | ||||||| || | | | | |
Sbjct 556265 CGACATGTGGAATGTCAAGCCCAGCGACCTCTGGGAGTGGGATAGCCTCAAGGAGC-AGG 556207
Query 364715 TTAAGAAGCATGGTACTCGCAACTCCCTCGTTAC-AGCGCCCATGCCCACGGCTTCTACT 364773
| ||| |||| |||| ||||||| | | ||| | || |||||||| || || |||||
Sbjct 556206 TCAAGGAGCACGGTATCCGCAACT-CTTTGTTGCTTGCTCCCATGCCTACTGCATCTACC 556148
Query 364774 GCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGC 364833
| ||||| || || ||||| ||||||||||| || | || ||| |||| |||
Sbjct 556147 TCGCAGATTCTTGGCAACAATGAGTGCTTCGAGCCCTACACTTCCAACATTTACCAGCGC 556088
Query 364834 CGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGAC 364893
|| || | | || || || | ||| ||||| | | ||||||||||| ||||
Sbjct 556087 CGTGTCTTGGCTGGTGAGTTCCAGGTTGTTAACCCCTGGTTGCTCAAGGATCTTGTCGAC 556028
Query 364894 CGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAG 364953
|| ||||| ||| |||||||||| |||||| || | || || ||| | |||
Sbjct 556027 ATGGGCTTGTGGTCTGATGCCATGAAGAACCGTATCATTGCTGAGAACGGATCTATTCAG 555968
Query 364954 AACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCC 365013
||||| || | || | || | ||| | ||||||| || || ||||| ||||||
Sbjct 555967 AACATCCCCAACATCCCTGCCGACATCAAGGCCCTTTACAAGACTGTTTGGGAGATTTCC 555908
Query 365014 ATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCG 365073
||| | | | ||| | ||||| || ||||| || ||| ||| |||||
Sbjct 555907 CAGCGCCAGGTTGTCCAGATGTCTGCCGACCGTGGTGCCTTCATCGACCAGTCTCAGTCC 555848
Query 365074 TTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGG 365133
|| ||| | |||| | |||| ||| | |||| | || |||||| ||| |||
Sbjct 555847 TTGAACATCCACATGCGTGAGCCCACCATGGGCAAGATCACCAGCATGCACTTCGCCGGT 555788
Query 365134 TGGAAATCCGGTCTTAAGACAGG 365156
||||| |||||| ||||| ||
Sbjct 555787 TGGAAGCTCGGTCTCAAGACCGG 555765
Score = 91.5 bits (100), Expect = 4e-13
Identities = 92/120 (77%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 111423 AAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAAC 111482
||||| |||||||| ||||| || || || || | ||| | |||||||| || |
Sbjct 935612 AAAATCTGGGATGGCAATGGCTCGCGCGAGTTCTTGGATAACGCTGGTCTTGGACACCGC 935553
Query 111483 GAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTAC 111542
|||| ||||||||||| || || |||||||| || ||||| |||||||| ||| |||||
Sbjct 935552 GAAGTTGGTGATCTCGGGCCCGTCTACGGATTCCAGTGGCGTCACTTTGGCGCAAACTAC 935493
Score = 91.5 bits (100), Expect = 4e-13
Identities = 148/210 (70%), Gaps = 5/210 (2%)
Strand=Plus/Plus
Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTT-CATTCGCGGAACG 22493
|| ||||| || ||||| ||||| ||||| |||| |||| | | || || | ||
Sbjct 3939359 AAGAAGGCCGACTGGGCCCTGAAGTGGATCTCTGACAA-GAACTCTACCTTTGCTCAGCG 3939417
Query 22494 TCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTT 22553
||| |||| ||||||| || || || || ||||| ||||| || ||| | |||||
Sbjct 3939418 TCTCGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCCATCTT 3939477
Query 22554 TTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCG 22613
||||| || || || | | ||||| ||||| || || || || ||| | || ||
Sbjct 3939478 CTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCG 3939537
Query 22614 AGATGAGGGTCTTCATACCGATTTTGCGTG 22643
|| ||||||||||| ||||| ||||| ||
Sbjct 3939538 TGACGAGGGTCTTCACACCGACTTTGCCTG 3939567
>seq2
Length=6006343
Score = 84.2 bits (92), Expect = 6e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 65914 GCCTTTACAAGACAACGCTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACG 65973
||||| || || | |||||||||||||||| | | ||||||||| || || ||||||| |
Sbjct 4337608 GCCTTCACCAGTCGACGCTGGATGTAACCAGTTTCTGCAGTTTTAACTGCAGTATCAATG 4337667
Query 65974 AGACCTTCACGCCCGGACATTGCAGAAAAGAAAAACTCAGTCGGTTGTAGACCAAGCATA 66033
|||||||| | |||| ||| || ||||| ||||| | || |||||| | |
Sbjct 4337668 AGACCTTCTCTACCGGCCATGGCGTGGAAGAAGAACTCGGATGGAGTGAGACCACGGAGG 4337727
Query 66034 AACGAATTTTGAATGTAACCA 66054
|||| || | || | |||||
Sbjct 4337728 TACGAGTTCTCAACGAAACCA 4337748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353165820332
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