Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 340 5e-88 seq2 84.2 6e-11 >seq1 Length=8525130 Score = 340 bits (376), Expect = 5e-88 Identities = 1040/1583 (66%), Gaps = 36/1583 (2%) Strand=Plus/Minus Query 363595 CAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGAC 363654 ||| | ||||| ||||| | | | |||||||| ||| ||| |||||||| | || Sbjct 557332 CAGCTTTCTTCCTGCTTCTTGGTTGACATGAAGGAGGATAGCATTGAGGGTATTTACGAT 557273 Query 363655 ACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCA 363713 || || |||| ||||| | || ||||||| || || || |||||| | | || ||| Sbjct 557272 ACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGCATTGGTCTCAACGC-CCA 557214 Query 363714 CAATGTTCGTGC-ACAGAACAGTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTG 363771 | | ||||| |||| | |||||| ||| || || || ||| || || | Sbjct 557213 CCGCATCCGTGCCACAGG-CTCTTACAT-CGCTGGTACCAACGGTACCTCCAACGGTGTC 557156 Query 363772 GTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAG 363831 | |||||| | ||||| || |||| || || | ||||||||||| ||||| ||| Sbjct 557155 ATCCCCATGTTGCGTGTCTTCAACAACACCGCCCGCTACGTCGACCAAGGTGGTAACAAG 557096 Query 363832 CGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTT 363891 || || || || || || || || ||||| || || ||| | |||||||| ||| Sbjct 557095 CGTCCCGGTGCCTTCGCCATCTACCTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTT 557036 Query 363892 GAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTT 363951 || || || || || || || || ||| | ||||| |||||||| ||| ||| || Sbjct 557035 GACCTTCGCAAGAATCATGGTAAGGAAGAAGTCCGTGCCCGTGATCTCTTCCTTGCTCTC 556976 Query 363952 TGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGA-ATTGGTCACTCTTTTG 364010 ||| || | || | ||| |||||||| || ||| || || | ||| | ||| | || Sbjct 556975 TGGATTCCCGATCTTTTCATGAAGCGTGTTGAGA-AGAACGGAGAGTGGACCCTCATGTG 556917 Query 364011 CCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGA 364070 ||| |||| || || || ||| ||||| | ||||| || | | || || ||||| Sbjct 556916 CCCCAACGAGTGCCCTGGCCTTGCCGATTGCTACGGTGAGGAATTCGAGGCCCTGTACGA 556857 Query 364071 AAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGC 364130 ||||| || | ||||| | || ||||| || || |||||||| |||| || Sbjct 556856 GAAGTACGAGGCTGAGGGCCGTGGCCGCAAGACCATCAAGGCTCAGAAGCTTTGGTACGC 556797 Query 364131 CATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAA 364190 |||| | || | |||| ||||| || | |||| ||| | ||||| || ||||| Sbjct 556796 CATCCTTGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTCTACAAGGACCACTGCAA 556737 Query 364191 CCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGA 364249 ||||||| ||||||| || || | ||||| | || |||| |||||| || || |||| Sbjct 556736 CCGCAAGAGCAACCAGAAGAACTTGGGTACCA-TCCGCAGCTCCAACCTCTGCACTGAGA 556678 Query 364250 TTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTC 364309 |||| || ||| || || || ||| || || || |||||||| || | || |||| Sbjct 556677 TTATCGAGTACTGTGCCCCTGATGAGGTCGCTGTCTGCAACCTTGCTTCCCTTGCTCTTC 556618 Query 364310 CGGCGTTTGT------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCT 364363 | || || || || || || | | |||| | || | || |||| || ||| Sbjct 556617 CTGCTTTCGTTGACTACAACGAGGGCAAGTATGACTTCAAGAAGCTCCATGAAGTCACCC 556558 Query 364364 ATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAG 364423 | || | |||| | ||||| | || ||| || | || || ||| || | Sbjct 556557 AGGTTGTTGTCCGCAACTTGAACAAGATCATTGACGTCAACCACTACCCCGTTCAGGAGG 556498 Query 364424 C-CG----AGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGC 364478 | || ||| || |||||||| || || |||||| | ||||| ||||| || || Sbjct 556497 CTCGTAACAGC-----AACATGCGTCACCGTCCCATTGGTGTCGGTGTTCAGGGTCTTGC 556443 Query 364479 TGACGTTTTTATGATGCTCAA--GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAAT 364536 ||||| || | |||| | | | || || || ||||| ||||||| || || Sbjct 556442 TGACGCCTTCCT--CGCTCTACGTCTCCCCTTCGAGTCCCCTGAGGCTCGTGAGCTGAAC 556385 Query 364537 AAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAA 364595 ||| |||| || || || || || || || | ||||| || |||| | ||||| || Sbjct 556384 AAGCAGATTTTCGAGACCATCTACCACGCTGCCGTCACTGCCTC-TGTGCAGTTGGCCAA 556326 Query 364596 AACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTT 364655 |||| |||||||||| |||| || || || |||| | |||| || Sbjct 556325 GGAAGAGGGTCCCTACTCTACTTTCAAGGGCTCTCCCGCCTCTGAGGGTATCCTCCAATT 556266 Query 364656 TGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACG 364714 || | |||||||||| ||| | || ||| | ||||||| || | | | | | Sbjct 556265 CGACATGTGGAATGTCAAGCCCAGCGACCTCTGGGAGTGGGATAGCCTCAAGGAGC-AGG 556207 Query 364715 TTAAGAAGCATGGTACTCGCAACTCCCTCGTTAC-AGCGCCCATGCCCACGGCTTCTACT 364773 | ||| |||| |||| ||||||| | | ||| | || |||||||| || || ||||| Sbjct 556206 TCAAGGAGCACGGTATCCGCAACT-CTTTGTTGCTTGCTCCCATGCCTACTGCATCTACC 556148 Query 364774 GCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGC 364833 | ||||| || || ||||| ||||||||||| || | || ||| |||| ||| Sbjct 556147 TCGCAGATTCTTGGCAACAATGAGTGCTTCGAGCCCTACACTTCCAACATTTACCAGCGC 556088 Query 364834 CGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGAC 364893 || || | | || || || | ||| ||||| | | ||||||||||| |||| Sbjct 556087 CGTGTCTTGGCTGGTGAGTTCCAGGTTGTTAACCCCTGGTTGCTCAAGGATCTTGTCGAC 556028 Query 364894 CGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAG 364953 || ||||| ||| |||||||||| |||||| || | || || ||| | ||| Sbjct 556027 ATGGGCTTGTGGTCTGATGCCATGAAGAACCGTATCATTGCTGAGAACGGATCTATTCAG 555968 Query 364954 AACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCC 365013 ||||| || | || | || | ||| | ||||||| || || ||||| |||||| Sbjct 555967 AACATCCCCAACATCCCTGCCGACATCAAGGCCCTTTACAAGACTGTTTGGGAGATTTCC 555908 Query 365014 ATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCG 365073 ||| | | | ||| | ||||| || ||||| || ||| ||| ||||| Sbjct 555907 CAGCGCCAGGTTGTCCAGATGTCTGCCGACCGTGGTGCCTTCATCGACCAGTCTCAGTCC 555848 Query 365074 TTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGG 365133 || ||| | |||| | |||| ||| | |||| | || |||||| ||| ||| Sbjct 555847 TTGAACATCCACATGCGTGAGCCCACCATGGGCAAGATCACCAGCATGCACTTCGCCGGT 555788 Query 365134 TGGAAATCCGGTCTTAAGACAGG 365156 ||||| |||||| ||||| || Sbjct 555787 TGGAAGCTCGGTCTCAAGACCGG 555765 Score = 91.5 bits (100), Expect = 4e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 111423 AAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAAC 111482 ||||| |||||||| ||||| || || || || | ||| | |||||||| || | Sbjct 935612 AAAATCTGGGATGGCAATGGCTCGCGCGAGTTCTTGGATAACGCTGGTCTTGGACACCGC 935553 Query 111483 GAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTAC 111542 |||| ||||||||||| || || |||||||| || ||||| |||||||| ||| ||||| Sbjct 935552 GAAGTTGGTGATCTCGGGCCCGTCTACGGATTCCAGTGGCGTCACTTTGGCGCAAACTAC 935493 Score = 91.5 bits (100), Expect = 4e-13 Identities = 148/210 (70%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTT-CATTCGCGGAACG 22493 || ||||| || ||||| ||||| ||||| |||| |||| | | || || | || Sbjct 3939359 AAGAAGGCCGACTGGGCCCTGAAGTGGATCTCTGACAA-GAACTCTACCTTTGCTCAGCG 3939417 Query 22494 TCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTT 22553 ||| |||| ||||||| || || || || ||||| ||||| || ||| | ||||| Sbjct 3939418 TCTCGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCCATCTT 3939477 Query 22554 TTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCG 22613 ||||| || || || | | ||||| ||||| || || || || ||| | || || Sbjct 3939478 CTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCG 3939537 Query 22614 AGATGAGGGTCTTCATACCGATTTTGCGTG 22643 || ||||||||||| ||||| ||||| || Sbjct 3939538 TGACGAGGGTCTTCACACCGACTTTGCCTG 3939567 >seq2 Length=6006343 Score = 84.2 bits (92), Expect = 6e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 65914 GCCTTTACAAGACAACGCTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACG 65973 ||||| || || | |||||||||||||||| | | ||||||||| || || ||||||| | Sbjct 4337608 GCCTTCACCAGTCGACGCTGGATGTAACCAGTTTCTGCAGTTTTAACTGCAGTATCAATG 4337667 Query 65974 AGACCTTCACGCCCGGACATTGCAGAAAAGAAAAACTCAGTCGGTTGTAGACCAAGCATA 66033 |||||||| | |||| ||| || ||||| ||||| | || |||||| | | Sbjct 4337668 AGACCTTCTCTACCGGCCATGGCGTGGAAGAAGAACTCGGATGGAGTGAGACCACGGAGG 4337727 Query 66034 AACGAATTTTGAATGTAACCA 66054 |||| || | || | ||||| Sbjct 4337728 TACGAGTTCTCAACGAAACCA 4337748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353165820332