Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq1 150 2e-31
seq3 125 7e-24
seq7 107 2e-18
>seq1
Length=8525130
Score = 150 bits (166), Expect = 2e-31
Identities = 344/506 (68%), Gaps = 15/506 (3%)
Strand=Plus/Plus
Query 46096 CGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAG 46155
|||||||| |||||||||| ||||||||||| || | | | || || || ||
Sbjct 3939356 CGCAAGAAGGCCGACTGGGCCCTGAAGTGGATCTCTGACAAGAACTCTACCTTTGCTCAG 3939415
Query 46156 CGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATC 46215
||| | || |||||||| || ||||| |||| || ||||| |||||| |||||
Sbjct 3939416 CGTCTCGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCCATC 3939475
Query 46216 TTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATC 46274
|| | |||| || | || | |||||||||| ||||| || ||||||||| || ||
Sbjct 3939476 TTCTGGCTCAAGAAGCGCGGTC-TCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTC 3939534
Query 46275 GCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGA 46334
|| |||||||| || || || |||||||| || || || ||||| | | | |
Sbjct 3939535 TCGTGACGAGGGTCTTCACACCGACTTTGCCTG--CCTTCT---GCACTC-CCACCTCAA 3939588
Query 46335 CAAGCTTGC--GCCCG--ACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGA 46390
||| | ||| || | | ||| | |||| ||| || || || ||||||||
Sbjct 3939589 CAACCGTGCCAGCAAGGAGGTCATTGCCG-GCATCATCACTGACGCTGTCACCATTGAGC 3939647
Query 46391 AGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGT 46450
||||||| |||| | || || || || ||||| ||||||||||| | |||
Sbjct 3939648 AGGAGTTCCTTACCGAGGCTCTTCCTTGCGCTCTGCTCGGCATGAACGCCAACCTCATGA 3939707
Query 46451 GCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATT 46510
| ||||| ||||| || || || || || ||||| ||| | | |||| |||
Sbjct 3939708 AGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTCGTCGCTCTTGGCAACGAGAAG-ATT 3939766
Query 46511 TTCACG-CGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAAT 46569
| || | | ||| || || || || ||| | ||||||||||| | ||||| || ||
Sbjct 3939767 TACAAGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAAC 3939826
Query 46570 TTTTTCGAAAAGCGCGTCGGCGAGTA 46595
|| ||||| ||||| || ||||||||
Sbjct 3939827 TTCTTCGAGAAGCGTGTTGGCGAGTA 3939852
Score = 98.7 bits (108), Expect = 9e-16
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| | |||||| ||||| ||||||||||| ||| |||
Sbjct 1348138 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 1348079
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | ||||||||||| || || || || || || || ||| || ||||| | |
Sbjct 1348078 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 1348019
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | |||||||| |||| ||||| ||| ||||| || || || || ||||
Sbjct 1348018 CGATGGTGTCCGAGGACTCGACCTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTCACGA 1347959
Query 131225 AA 131226
||
Sbjct 1347958 AA 1347957
>seq3
Length=4610873
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | ||| | ||| || ||||| || |||||||| |||
Sbjct 3673648 CCACCACGGAGGCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAA 3673707
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || ||||||||||| || | || | ||||||||||| ||||||
Sbjct 3673708 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGAGGG 3673767
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||||| | || | ||| |||| ||||| |
Sbjct 3673768 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATAGTGTCGGAAGACTCAACC 3673827
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||||| ||| || ||||| | ||| || ||||| ||||||||
Sbjct 3673828 TCGAGGGTAATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 3673874
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||||||| || || | || |||||||| ||||||||||| ||||||
Sbjct 3673420 CCACCACGGAGACGCAGCACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGCTC 3673479
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| |||||||| || || |||| | ||||||||| || ||||||
Sbjct 3673480 AGAGTGCGACCGTCCTCGAGCTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGGG 3673539
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || ||| || ||||| | || | || || | ||||| |
Sbjct 3673540 ATACCCTCCTTATCTTGGATCTTTGACTTGACATTGTCGATTGTGTCCGATGACTCAACT 3673599
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| || || || || ||||| || || || || |||||
Sbjct 3673600 TCTAATGTAATAGTCTTGCCAGTAAGAGTCTTGACAAAGATTTGCAT 3673646
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||||||||||| ||| || || | ||| | || |||||| ||||||||||| ||
Sbjct 3673191 GCCACCGCGCAGACGGAGGACGAGATGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGA 3673250
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||||| || || |||||||| || || |||| | ||| |||||||| |||||
Sbjct 3673251 GAGAGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCAGGAGG 3673310
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || || || || ||| ||||| | || | ||||| | ||||| |
Sbjct 3673311 AATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATGGTATCAGAAGACTCAAC 3673370
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || ||||| || || || ||||||||||||||
Sbjct 3673371 CTCCAATGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 3673418
Score = 91.5 bits (100), Expect = 1e-13
Identities = 121/168 (72%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102
|||||| |||||||||||||| | |||||| ||||| ||||||||||| ||| |
Sbjct 3673911 CTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAA 3673970
Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162
|| | ||||||||||| || || ||||| || ||||| || || ||||| |
Sbjct 3673971 AATCAGGCGCTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTT 3674030
Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210
|| | || |||| ||||| | |||| ||||| ||| || |||||
Sbjct 3674031 GTCAATGGTGTCGGAAGACTCAACCTCGAGGGTAATGGTCTTGCCGGT 3674078
>seq7
Length=1200748
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || || || | || | || |||||||| || |||||||| |||
Sbjct 1041565 CCACCACGCAGGCGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1041506
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| ||| |||| | ||||||||||| || |||
Sbjct 1041505 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 1041446
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || ||| || ||||| | || | || |||| ||||| |
Sbjct 1041445 ATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACC 1041386
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || || || || || || ||||||||||||||
Sbjct 1041385 TCAAGGGTGATCGTCTTTCCCGTAAGGGTCTTGACGAAAATCTGCAT 1041339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012646595840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |