Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq1 190 3e-43
>seq1
Length=8525130
Score = 190 bits (210), Expect = 3e-43
Identities = 396/587 (67%), Gaps = 6/587 (1%)
Strand=Plus/Minus
Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720
|| || || ||| ||| ||||||||||| | | || | |||||||| || || ||
Sbjct 3939567 CAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGA 3939508
Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780
|||||||| || || ||||| || ||||| || ||||| ||||| | ||||| |||||
Sbjct 3939507 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAG 3939448
Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 32837
|| || || || || |||||||||| || | || || | | | |||||
Sbjct 3939447 ATACCCTCGACGGCAGCAAAGGCAACGAGACGCTGAGCAAAGGTAGAGTTCTTGTCAGAG 3939388
Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897
|||||||| | ||||| ||||||||||| | ||| || || ||||| || || ||
Sbjct 3939387 ATCCACTTCAGGGCCCAGTCGGCCTTCTTGCGGATACAGGGAATGGTCTCAATGGCGTTG 3939328
Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957
||||| || | | || || || || || |||||||| | || || |
Sbjct 3939327 AAGAGGTATGTGCGCTGGGTAGGCTCCTTGACGTAGGTATCAATAAGCAGGGAGTATGTC 3939268
Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017
|| || || ||||| || || || || || ||||||||||| | | |||||| ||||
Sbjct 3939267 TCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGACCCTCGGGAATC 3939208
Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077
|| || || | | || || || | || || || || || |||||| ||| |||
Sbjct 3939207 TGGACCTCGTTGGAGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCAGAGGCGGCA 3939148
Query 33078 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGTGTTA-GTTTATTCCAA 33134
|| || || | | || || || ||||| ||||| | || | | || ||||||
Sbjct 3939147 AAGAAGGCAAGAATGTGGGAGATGAAGTATTTCTCGTCATCGTTGAGACGGTTGTTCCAA 3939088
Query 33135 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33194
|| | | ||| || || | ||| | |||||| ||||||| ||||| ||||| |||||
Sbjct 3939087 TCGTGCAGATCCTTGGAAAGATCGATTTCTTCGGCTGTCCAGAATGAGGCCTCGGCCTTC 3939028
Query 33195 TTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241
|| ||||| | |||||| || || || | || || || | ||| ||
Sbjct 3939027 TTGTACATCTGCCAGATCTCGTGGTACTTGATGGGGAAGAGAACGAA 3938981
Score = 159 bits (176), Expect = 4e-34
Identities = 452/690 (66%), Gaps = 16/690 (2%)
Strand=Plus/Plus
Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079
|| ||||| || || | || ||||| | | ||||||||||| | || || || |||
Sbjct 556896 AGGCCAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTC 556955
Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139
|| || ||||| |||||||| ||||| | || ||||| | || | ||| || ||
Sbjct 556956 ATGAAAAGATCGGGAATCCAGAGAGCAAGGAAGAGATCACGGGCACGGACTTCTTCCTTA 557015
Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199
|| |||||| ||| || |||||| | | | ||| | ||||| || || | |||
Sbjct 557016 CCATGATTCTTGCGAAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAG 557075
Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259
||||| | | || || || ||||| || || || || | ||| | |||||||| ||
Sbjct 557076 ATGGCGAAGGCACCGGGACGCTTGTTACCACCTTGGTCGACGTAGCGGGCGGTGTTGTTG 557135
Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319
| || | |||||| || || | ||| ||||| ||||| ||||| || | ||| ||
Sbjct 557136 AAGACACGCAACATGGGGATGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAG 557195
Query 63320 CCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377
|| ||||||| || | ||| ||||| || || || ||||| || ||||| |
Sbjct 557196 CCTGTGGCACGGATGCGGTGGGCGTTG--AGACCAATGCCACCAGCCATCTTGGAGATCA 557253
Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437
|| || || | ||||| || || ||||| || ||||| ||| |||||| || |
Sbjct 557254 TGGCACAGGTCTTGAGGGTATCGTAAATACCCTCAATGCTATCCTCCTTCATGTCAACCA 557313
Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497
|| ||| ||| | ||| | || || || || || | |||||| || || |
Sbjct 557314 AGAAGCAGGAAGAAAGCTGGCACTGGGGTGTACCGGCGTTGAAGAGGGTAGGGGAGGCAT 557373
Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATA----GCT-GA-GTCTATAT 63551
| || || | || | ||| | || ||||| ||||| | | ||| || || |
Sbjct 557374 GGGTGAAGAACTTGTTAGACATGAGGTTGTAGGTCTCGAGAACACGCTCGATGTTGTCAC 557433
Query 63552 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 63611
|||| ||| || || ||||| | ||| | ||||||||| || | || |||||||
Sbjct 557434 CCCA------AATACCGACAGCGACTCTCATGATCATGTGCTGGGGACGCTCGACGATCT 557487
Query 63612 TGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 63671
|| || || || | || ||| || || | ||| || || || || || | |||
Sbjct 557488 TGCCGTCAATCTTGAGCAGGTATGAGCGCTCAAGAGTCTTGAAGCCGAAGTACTGGTAGT 557547
Query 63672 AAAAGTCTCGTTCGTAAATAATAACCGAGT 63701
||||| || ||||| | ||| | ||||
Sbjct 557548 TGAAGTCACGGTCGTAGACAATGGCAGAGT 557577
Score = 102 bits (112), Expect = 1e-16
Identities = 309/477 (65%), Gaps = 3/477 (1%)
Strand=Plus/Plus
Query 61838 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 61897
|||| ||| | ||||| ||||||||||||| || | | ||||| || ||||||||
Sbjct 555705 TCCTGGTCGACGGTGAACTGAATGGGAGCGGCAGCAGCCTGGGTACGGAGGTAGTACATG 555764
Query 61898 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 61957
|| || || |||||||| |||| ||| || ||||| || || | ||| |
Sbjct 555765 CCGGTCTTGAGACCGAGCTTCCAACCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGTG 555824
Query 61958 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62017
|| || || ||||| |||| || ||| || ||||||||||| || | ||| |||
Sbjct 555825 GGCTCACGCATGTGGATGTTCAAGGACTGAGACTGGTCGATGAAGGCACCACGGTCGGCA 555884
Query 62018 GCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 62077
| ||| | | || | || | ||| ||||||| ||| || |||| ||| ||
Sbjct 555885 GACATCTGGACAACCTGGCGCTGGGAAATCTCCCAAACAGTCTTGTAAAGGGCCTTGATG 555944
Query 62078 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 62134
|| | || | ||| | | |||||||| ||||| || || || || | |||||
Sbjct 555945 TCGGCAGGGATGTTGGGGATGTTCTGAATAGATCCGTTCTCAGCAATGATACGGTTCTTC 556004
Query 62135 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 62194
|| ||||| ||| || | ||| | | | | || | || ||||| ||
Sbjct 556005 ATGGCATCAGACCACAAGCCCATGTCGACAAGATCCTTGAGCAACCAGGGGTTAACAACC 556064
Query 62195 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 62254
|| || || |||| ||| || | || |||||| || || || || || | ||
Sbjct 556065 TGGAACTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGAAGTGTAGGGCTCGAAGCAC 556124
Query 62255 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311
||||| || || | ||| || | || |||||||| ||||| || || | ||| |||
Sbjct 556125 TCATTGTTGCCAAGAATCTGCGAGGTAGATGCAGTAGGCATGGGAGCAAGCAACAAA 556181
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631794069600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |