Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1 215 6e-51
>seq1
Length=8525130
Score = 215 bits (238), Expect = 6e-51
Identities = 410/603 (68%), Gaps = 3/603 (0%)
Strand=Plus/Minus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| ||||||||||| || | ||| ||||| || || || | ||| ||| ||| || |
Sbjct 3939568 GCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAG 3939509
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
||| || | || || || ||||||||||| || || || ||||| |||||| || ||
Sbjct 3939508 ACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAA 3939449
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270
||||| || ||||| ||||| || || | ||| | ||||| | | | ||
Sbjct 3939448 GATACCCTCGACGGCAGCAAAGGCAACGAGACGCTGAGCAAAGGTAGAGTTCTTGTCAGA 3939389
Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330
|||||| || | ||||| ||||| || || ||||| || | || || || |||||
Sbjct 3939388 GATCCACTTCAGGGCCCAGTCGGCCTTCTTGCGGATACAGGGAATGGTCTCAATGGCGTT 3939329
Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390
|| ||||| |||| | | || | ||| ||||| || | ||| || || |
Sbjct 3939328 GAAGAGGTATGTGCGCTGGGTAGGCTCCTTGACGTAGGTATCAATAAGCAGGGAGTATGT 3939269
Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450
||||| |||| |||||||| || ||||| |||||||| || | | | || | ||
Sbjct 3939268 CTCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGACCCTCGGGAAT 3939209
Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510
||| || || | || || | ||| | || || || || || ||||| || || || ||
Sbjct 3939208 CTGGACCTCGTTGGAGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCAGAGGCGGC 3939149
Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGCTTATCCCA 93567
||| || || | || || || || | |||||| ||||| || | | || | |||
Sbjct 3939148 AAAGAAGGCAAGAATGTGGGAGATGAAGTATTTCTCGTCATCGTTGAGACGGTTGTTCCA 3939089
Query 93568 ATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627
|||| ||||| || |||||||||| ||||||| | ||||| || || || || || ||
Sbjct 3939088 ATCGTGCAGATCCTTGGAAAGATCGATTTCTTCGGCTGTCCAGAATGAGGCCTCGGCCTT 3939029
Query 93628 TTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTT 93687
|||||||| | ||| || || || || | || || || | || || || || |||||
Sbjct 3939028 CTTGTACATCTGCCAGATCTCGTGGTACTTGATGGGGAAGAGAACGAAGCGGTTGGGGTT 3938969
Query 93688 ATC 93690
||
Sbjct 3938968 CTC 3938966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860619020240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |