Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq7 127 2e-24
seq3 116 3e-21
>seq7
Length=1200748
Score = 127 bits (140), Expect = 2e-24
Identities = 148/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| ||||| || || || | || || || ||| |||| ||||| ||||| |
Sbjct 1041336 AAGATGCAGATTTTCGTCAAGACCCTTACGGGAAAGACGATCACCCTTGAGGTGGAGTCT 1041395
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | ||| || |||| || || || || ||||||||||| || || ||
Sbjct 1041396 TCCGACACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCCCCTGAC 1041455
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || || || || || || ||||| ||| | |||||| ||||||| ||||||| |||
Sbjct 1041456 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTAC 1041515
Query 22396 AACATTCAAAAAGAATCCAC 22415
||||| || || || |||||
Sbjct 1041516 AACATCCAGAAGGAGTCCAC 1041535
>seq3
Length=4610873
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || | ||||| || ||| |||| | || || || | |
Sbjct 3673418 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACGATCACATTGGAGGTTGAGTCTTCT 3673359
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | |||| || ||||| || |||||||||||||| || || ||
Sbjct 3673358 GATACCATCGACAACGTCAAGTCGAAGATTCAGGATAAGGAGGGTATTCCTCCTGACCAG 3673299
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||||||||| ||||| || || ||| | || ||| |||||| |||| || ||||||
Sbjct 3673298 CAACGTCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACTCTCTCTGACTACAAC 3673239
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||||| || || ||| | ||| | || | || ||||||| ||
Sbjct 3673238 ATTCAGAAGGAGAGCACTCTGCATCTCGTCCTCCGTCTGCGCGGTGG 3673192
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||||| ||||| || || | || || || || || | ||
Sbjct 3673874 ATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATTACCCTCGAGGTTGAGTCTTCC 3673815
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || || || ||||||||||| || || || || ||
Sbjct 3673814 GACACTATTGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 3673755
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || ||||||||||| ||| | || ||| ||||||| | ||||| ||||||
Sbjct 3673754 CAGCGCCTGATTTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTTTCCGACTACAAC 3673695
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || ||||| ||| | ||| | ||| | || | || || |||
Sbjct 3673694 ATCCAGAAGGAATCTACCCTTCATCTCGTTCTCCGCCTCCGTGGTGGT 3673647
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || ||| | || || || || | || | ||||| || | |
Sbjct 3673646 ATGCAAATCTTTGTCAAGACTCTTACTGGCAAGACTATTACATTAGAAGTTGAGTCATCG 3673587
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| ||| || ||||| ||||||||||| || || |||||
Sbjct 3673586 GACACAATCGACAATGTCAAGTCAAAGATCCAAGATAAGGAGGGTATCCCTCCTGATCAG 3673527
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| |||||||| |||||||| || ||| | ||||| ||||| | ||| ||||||
Sbjct 3673526 CAGCGTCTTATCTTTGCCGGTAAGCAGCTCGAGGACGGTCGCACTCTGAGCGACTACAAC 3673467
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || || | || || || |||| | || || |||
Sbjct 3673466 ATTCAGAAGGAGTCTACTCTGCACTTGGTGCTGCGTCTCCGTGGTGGT 3673419
Score = 98.7 bits (108), Expect = 8e-16
Identities = 122/167 (73%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || | || || || || || | |||| ||| | ||| | ||||
Sbjct 3674078 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCTTCCGACACCATTGACAACGTCAAGTCC 3674019
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| ||||| ||||||||||| ||||| || || || || || || || || || |||||
Sbjct 3674018 AAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAGCAGCGCCTGATTTTCGCTGGCAAG 3673959
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGA 22409
||| | |||||| ||||||| |||| |||||||||||||| || ||
Sbjct 3673958 CAGCTCGAGGATGGCCGCACCCTCTCTGATTACAACATTCAGAAGGA 3673912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727866998690
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |