Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1 192 1e-43
seq7 158 2e-33
seq3 152 9e-32
>seq1
Length=8525130
Score = 192 bits (212), Expect = 1e-43
Identities = 583/891 (65%), Gaps = 21/891 (2%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || |||||||||||||| || || |||||||||||||| |||||| |
Sbjct 3939871 CATGACACCGGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACC 3939812
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTT-CTCGGCGCCAAACTGCTTGGGGTAAC 10053
||||| ||| |||||||||||| |||||||| | | | || | ||| || |
Sbjct 3939811 AAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGACTTGTAAAT-CTTCTCGTTGC 3939753
Query 10054 CGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGT 10113
| || || || | || ||||| |||||||| |||||||| |||| |||| | ||
Sbjct 3939752 CAAGAGCGACGAGGAGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTTGGCGT 3939693
Query 10114 TCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCG 10173
||||||| | || ||| || | || ||| || ||| |||| || ||| ||| |
Sbjct 3939692 TCATGCCGAGCAGAGCGCAAGGAAGAGCCTCGGTAAGGAACTCCTGCTCAATGGTGACAG 3939633
Query 10174 CTTCCTCGACGATGC---TCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230
| || || ||||| | ||| | | || | ||||| ||| | || |
Sbjct 3939632 CGTCAGTGATGATGCCGGCAATGACCTCCTTGCTGGCACGGTTGTT---GAGGTGGGAGT 3939576
Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290
||| || |||| | ||| || |||||||| || ||||| ||||||||| |
Sbjct 3939575 GCAGAAGGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGA 3939516
Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350
| ||||||||||||||| || || || |||||||| |||| | || | || |
Sbjct 3939515 AGGTCAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAG 3939456
Query 10351 AGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG-AGCGGTC- 10408
|||| | | |||||| ||| | |||| ||||| |||| || |||| || | ||
Sbjct 3939455 AGAAGAAGATACCCTCGACGGCAGCAAAGGCAACGAGACGCTGAGCAAAGGTAGAGTTCT 3939396
Query 10409 -GCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGG-ATCGTCTCG 10466
| || | | ||| |||||| | |||||||| | | ||||| || |||||
Sbjct 3939395 TGTCAGAGATCCACTTCAGGGCCCAGTCGGCCTTCTTGCGGA-TACAGGGAATGGTCTCA 3939337
Query 10467 ATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGG 10526
|| || | |||||| | | |||| ||| |||| | | ||||| ||||||
Sbjct 3939336 ATGGCGTTGAAGAGGTATGTGCGCTGGGTAGGCTCCTTGACGTAGGTATCAATAAGCAGG 3939277
Query 10527 GAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCC 10586
|||||| ||| ||||| | |||| | |||| || ||||||| || ||
Sbjct 3939276 GAGTATGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGACCC 3939217
Query 10587 GAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCG 10646
||| | ||| || | || ||| | | |||||||| | || || || ||
Sbjct 3939216 TCGGGAATCTGGACCTCGTTGGAGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCA 3939157
Query 10647 CTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTT----CAG 10702
| | ||||||||| | || ||||| |||||||| ||| |||||||| | |
Sbjct 3939156 GAGGCGGCAAAGAAGGCAAGAATGTGGGAGATGAAGTATTTCTCGTCATCGTTGAGACGG 3939097
Query 10703 TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGT 10762
|| || ||| || || ||||| | || | || || || | |||||||| |
Sbjct 3939096 TTGTT----CCAATCGTGCAGATCCTTGGAAAGATCGATTTCTTCGGCTGTCCAGAATGA 3939041
Query 10763 GGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813
||| ||||||||||||||||||| | || ||| ||||| |||||||||
Sbjct 3939040 GGCCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTACTTGATGGGGAA 3938990
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || |||||||| || | ||||| || | |||||| || ||||| ||
Sbjct 1348136 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 1348077
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || |||||||| ||||| || || ||||| | |||||| |||
Sbjct 1348076 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 1348017
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| | || || || || | ||| ||||| || ||||| |||||||| |||||
Sbjct 1348016 ATGGTGTCCGAGGACTCGACCTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTCACGAA 1347958
>seq7
Length=1200748
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | ||| || |||||||| || |||||||| || ||||||
Sbjct 1041565 CCACCACGCAGGCGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1041506
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || || | || ||||| || ||
Sbjct 1041505 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 1041446
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| || || ||||| | |||||| || |||||||| | || || ||
Sbjct 1041445 ATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACC 1041386
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || |||||||| |||||||||||||| ||||||||
Sbjct 1041385 TCAAGGGTGATCGTCTTTCCCGTAAGGGTCTTGACGAAAATCTGCAT 1041339
>seq3
Length=4610873
Score = 152 bits (168), Expect = 9e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| || || | || | || || ||| ||| || || ||||| || || |||
Sbjct 3673192 CCACCGCGCAGACGGAGGACGAGATGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAG 3673251
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| || || || || || | ||| ||||| || |||
Sbjct 3673252 AGAGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCAGGAGGA 3673311
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| || |||||||| | ||||||| |||||||| || | || || ||
Sbjct 3673312 ATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATGGTATCAGAAGACTCAACC 3673371
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| ||||| || || || ||||||||||||||||| ||||||||
Sbjct 3673372 TCCAATGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 3673418
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | || || || || || || |||||||| || |||||
Sbjct 3673648 CCACCACGGAGGCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAA 3673707
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| ||||| || || || | || ||||| || ||
Sbjct 3673708 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGAGGG 3673767
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| || || ||||| | || || ||
Sbjct 3673768 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATAGTGTCGGAAGACTCAACC 3673827
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||| ||||| ||||| || | ||||||||||| ||||||||
Sbjct 3673828 TCGAGGGTAATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 3673874
Score = 91.5 bits (100), Expect = 3e-13
Identities = 170/247 (69%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 225751 GGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCT-GAG 225809
|||||| || | ||| | ||| | |||||| || ||| | || ||| || || |
Sbjct 1862427 GGTCATTTCGGTATCAGCAGAGTCCAGGTCGTGCTCGACGAAGACAGTCTTGACCTCGCT 1862368
Query 225810 AAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGC 225869
|| | |||||||||||| | ||| | || || || || | ||||| |||||
Sbjct 1862367 CTGCTT-GGGGAAGCCCTCGACCTGCTCGTTGTTGATGGCGCGCATGAGGGTGGACTTGC 1862309
Query 225870 CCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGG 225929
| | |||||||||||| || ||||| | | || ||||||| | |||| | ||
Sbjct 1862308 CAGAACCGTTGGGACCGCAAAGACCGTAGCGCTGACCACGCTTGAGGCGGAGGTGAGTCT 1862249
Query 225930 AGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCAC 225989
||| || || |||||| |||| |||||||| ||||| ||| | ||| || |||||||
Sbjct 1862248 GGTTGAGAAGAATCTTGGCACCGTAGGCAAGAGAGAAAGTGCAGTTGCAGAGATCCTCAC 1862189
Query 225990 CCTCCTC 225996
|||| ||
Sbjct 1862188 CCTCTTC 1862182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622100472720
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