Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1 192 1e-43 seq7 158 2e-33 seq3 152 9e-32 >seq1 Length=8525130 Score = 192 bits (212), Expect = 1e-43 Identities = 583/891 (65%), Gaps = 21/891 (2%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || |||||||||||||| || || |||||||||||||| |||||| | Sbjct 3939871 CATGACACCGGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACC 3939812 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTT-CTCGGCGCCAAACTGCTTGGGGTAAC 10053 ||||| ||| |||||||||||| |||||||| | | | || | ||| || | Sbjct 3939811 AAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGACTTGTAAAT-CTTCTCGTTGC 3939753 Query 10054 CGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGT 10113 | || || || | || ||||| |||||||| |||||||| |||| |||| | || Sbjct 3939752 CAAGAGCGACGAGGAGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTTGGCGT 3939693 Query 10114 TCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCG 10173 ||||||| | || ||| || | || ||| || ||| |||| || ||| ||| | Sbjct 3939692 TCATGCCGAGCAGAGCGCAAGGAAGAGCCTCGGTAAGGAACTCCTGCTCAATGGTGACAG 3939633 Query 10174 CTTCCTCGACGATGC---TCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230 | || || ||||| | ||| | | || | ||||| ||| | || | Sbjct 3939632 CGTCAGTGATGATGCCGGCAATGACCTCCTTGCTGGCACGGTTGTT---GAGGTGGGAGT 3939576 Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 ||| || |||| | ||| || |||||||| || ||||| ||||||||| | Sbjct 3939575 GCAGAAGGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGA 3939516 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350 | ||||||||||||||| || || || |||||||| |||| | || | || | Sbjct 3939515 AGGTCAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAG 3939456 Query 10351 AGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG-AGCGGTC- 10408 |||| | | |||||| ||| | |||| ||||| |||| || |||| || | || Sbjct 3939455 AGAAGAAGATACCCTCGACGGCAGCAAAGGCAACGAGACGCTGAGCAAAGGTAGAGTTCT 3939396 Query 10409 -GCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGG-ATCGTCTCG 10466 | || | | ||| |||||| | |||||||| | | ||||| || ||||| Sbjct 3939395 TGTCAGAGATCCACTTCAGGGCCCAGTCGGCCTTCTTGCGGA-TACAGGGAATGGTCTCA 3939337 Query 10467 ATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGG 10526 || || | |||||| | | |||| ||| |||| | | ||||| |||||| Sbjct 3939336 ATGGCGTTGAAGAGGTATGTGCGCTGGGTAGGCTCCTTGACGTAGGTATCAATAAGCAGG 3939277 Query 10527 GAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCC 10586 |||||| ||| ||||| | |||| | |||| || ||||||| || || Sbjct 3939276 GAGTATGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGACCC 3939217 Query 10587 GAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCG 10646 ||| | ||| || | || ||| | | |||||||| | || || || || Sbjct 3939216 TCGGGAATCTGGACCTCGTTGGAGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCA 3939157 Query 10647 CTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTT----CAG 10702 | | ||||||||| | || ||||| |||||||| ||| |||||||| | | Sbjct 3939156 GAGGCGGCAAAGAAGGCAAGAATGTGGGAGATGAAGTATTTCTCGTCATCGTTGAGACGG 3939097 Query 10703 TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGT 10762 || || ||| || || ||||| | || | || || || | |||||||| | Sbjct 3939096 TTGTT----CCAATCGTGCAGATCCTTGGAAAGATCGATTTCTTCGGCTGTCCAGAATGA 3939041 Query 10763 GGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813 ||| ||||||||||||||||||| | || ||| ||||| ||||||||| Sbjct 3939040 GGCCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTACTTGATGGGGAA 3938990 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || |||||||| || | ||||| || | |||||| || ||||| || Sbjct 1348136 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 1348077 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| ||||| || || ||||| | |||||| ||| Sbjct 1348076 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 1348017 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | ||| ||||| || ||||| |||||||| ||||| Sbjct 1348016 ATGGTGTCCGAGGACTCGACCTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTCACGAA 1347958 >seq7 Length=1200748 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || |||||||| || |||||||| || |||||| Sbjct 1041565 CCACCACGCAGGCGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1041506 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| || || Sbjct 1041505 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 1041446 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || || ||||| | |||||| || |||||||| | || || || Sbjct 1041445 ATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACC 1041386 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || |||||||| |||||||||||||| |||||||| Sbjct 1041385 TCAAGGGTGATCGTCTTTCCCGTAAGGGTCTTGACGAAAATCTGCAT 1041339 >seq3 Length=4610873 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | || | || || ||| ||| || || ||||| || || ||| Sbjct 3673192 CCACCGCGCAGACGGAGGACGAGATGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAG 3673251 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || || || || || | ||| ||||| || ||| Sbjct 3673252 AGAGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCAGGAGGA 3673311 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || |||||||| | ||||||| |||||||| || | || || || Sbjct 3673312 ATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATGGTATCAGAAGACTCAACC 3673371 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || || || ||||||||||||||||| |||||||| Sbjct 3673372 TCCAATGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 3673418 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | || || || || || || |||||||| || ||||| Sbjct 3673648 CCACCACGGAGGCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAA 3673707 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| ||||| || || || | || ||||| || || Sbjct 3673708 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGAGGG 3673767 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| || || ||||| | || || || Sbjct 3673768 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATAGTGTCGGAAGACTCAACC 3673827 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| ||||| ||||| || | ||||||||||| |||||||| Sbjct 3673828 TCGAGGGTAATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 3673874 Score = 91.5 bits (100), Expect = 3e-13 Identities = 170/247 (69%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 225751 GGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCT-GAG 225809 |||||| || | ||| | ||| | |||||| || ||| | || ||| || || | Sbjct 1862427 GGTCATTTCGGTATCAGCAGAGTCCAGGTCGTGCTCGACGAAGACAGTCTTGACCTCGCT 1862368 Query 225810 AAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGC 225869 || | |||||||||||| | ||| | || || || || | ||||| ||||| Sbjct 1862367 CTGCTT-GGGGAAGCCCTCGACCTGCTCGTTGTTGATGGCGCGCATGAGGGTGGACTTGC 1862309 Query 225870 CCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGG 225929 | | |||||||||||| || ||||| | | || ||||||| | |||| | || Sbjct 1862308 CAGAACCGTTGGGACCGCAAAGACCGTAGCGCTGACCACGCTTGAGGCGGAGGTGAGTCT 1862249 Query 225930 AGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCAC 225989 ||| || || |||||| |||| |||||||| ||||| ||| | ||| || ||||||| Sbjct 1862248 GGTTGAGAAGAATCTTGGCACCGTAGGCAAGAGAGAAAGTGCAGTTGCAGAGATCCTCAC 1862189 Query 225990 CCTCCTC 225996 |||| || Sbjct 1862188 CCTCTTC 1862182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622100472720