Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq3 100 2e-16
>seq3
Length=4610873
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | || || || || | ||||| || || ||||||||||| |||
Sbjct 3673417 ATACCACCACGGAGACGCAGCACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAGTCG 3673476
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|||| ||| ||| || || || || ||||| || |||| |||||||| || || |||
Sbjct 3673477 CTCAGAGTGCGACCGTCCTCGAGCTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGA 3673536
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || || || |||||| || | | || | ||||| | || ||
Sbjct 3673537 GGGATACCCTCCTTATCTTGGATCTTTGACTTGACATTGTCGATTGTGTCCGATGACTCA 3673596
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || ||||| || ||||| || ||||| || |||||
Sbjct 3673597 ACTTCTAATGTAATAGTCTTGCCAGTAAGAGTCTTGACAAAGATTTGCAT 3673646
Score = 96.9 bits (106), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251
|| || ||||||||||| || | ||| || ||||||||| || |||||||| ||
Sbjct 3673228 TCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAG 3673287
Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311
|| ||||| || ||||| |||||||| || || || || |||||| || | |
Sbjct 3673288 ATAAGACGTTGCTGGTCAGGAGGAATACCCTCCTTATCCTGAATCTTCGACTTGACGTTG 3673347
Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371
|| | ||| || | || || || |||| || | ||| |||||||| || || || ||
Sbjct 3673348 TCGATGGTATCAGAAGACTCAACCTCCAATGTGATCGTCTTGCCGGTGAGGGTCTTGACG 3673407
Query 114372 AAAATCTGCAT 114382
|||||||||||
Sbjct 3673408 AAAATCTGCAT 3673418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134266869912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |