Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1 379 4e-100 >seq1 Length=8525130 Score = 379 bits (420), Expect = 4e-100 Identities = 1223/1890 (65%), Gaps = 65/1890 (3%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||| | ||| ||| | || |||| ||| | ||||||||||||||||||||| Sbjct 555714 ACGGTGAACTGAATGGGAGCGGCAGCAGCCTGGGTACGGAGGTAGTACATGCCGGTCTTG 555773 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || || ||| || || ||||||| || | ||| ||| || ||| Sbjct 555774 AGACCGAGCTTCCAACCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGTGGGCT----- 555828 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916 | | || || ||| | |||||| |||||||| ||||| | || || Sbjct 555829 -------CACGCATGTGGATGTTCAAGGACTGAGACTGGTCGATGAAGGCACCACGGTCG 555881 Query 243917 GCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTG 243976 || | ||| || | | ||| || ||||| | | |||||||| | || |||| Sbjct 555882 GCAGACATCTGGACAACCTGGCGCTGGGAAATCTCCCAAACAGTCTTGTAAAGGGCCTTG 555941 Query 243977 AGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTG 244036 | || | |||| ||||||||| | || || || | | |||| || | Sbjct 555942 ATGTCGGCAGGGATGTTGGGGATGTTCTGAATAGATCCGTTCTCAGCAATGATACGGTTC 556001 Query 244037 CGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGA----CCAGGTGCCTGTT 244092 |||| ||| ||||| ||||| | | || ||| || ||||| | || Sbjct 556002 TTCATGGCATCAGACCACAAGCCCATGTCGACAAGATCCTTGAGCAACCAGGGG----TT 556057 Query 244093 CACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTC 244152 || ||||| ||||| || | || || ||||||||||| | |||| || ||||| Sbjct 556058 AACAACCTGGAACTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGAAGTGTAGGGCTC 556117 Query 244153 GATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAG 244212 || || ||| ||||||| || ||||||| || ||||| |||||||| | | || Sbjct 556118 GAAGCACTCATTGTTGCCAAGAATCTGCGAGGTAGATGCAGTAGGCATGGGAGCAAGCAA 556177 Query 244213 CAGACTGTTCCTCACGCCGTGCCTCTGGA--TGCGGAGTCTGAGCTCGTTCCAGTCCCAC 244270 || | ||| | | |||||| || || ||| || || | | |||||| Sbjct 556178 CAAAGAGTTGCGGATACCGTGCTCCTTGACCTGC----TC----CTTGAGGCTATCCCAC 556229 Query 244271 ATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTG 244330 || ||||||| | | |||| ||||||||| || || || | |||| | Sbjct 556230 T---CCCAGAGGTCGCTGGGCTTGACATTCCACATGTCGAATTGGAGGATACCCTCAGAG 556286 Query 244331 ACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTC 244389 |||| ||||| | | || | ||||||||| || || ||||| || |||| Sbjct 556287 GCGGGAGAGCCCTTGAAAGTAGAGTAGGGACCCTCTTCCTTGGCCAACTGCACAGAGGCA 556346 Query 244390 GTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCC 244449 || || ||| |||| ||||||||||||||| ||| |||||||| || || |||| Sbjct 556347 GT-GACGGCAGCGTGGTAGATGGTCTCGAAAATCTGCTTGTTCAGCTCACGAGCCTCAGG 556405 Query 244450 GCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCC 244509 | | |||||||| | | | |||| |||| || || ||||| || |||| || Sbjct 556406 GGACTCGAAGGGGAGACGTAGAGCGAGGAAGGCGTCAGCAAGACCCTGAACACCGACACC 556465 Query 244510 GATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTC 244569 ||||| | ||| ||| ||||| | || || | |||||||| |||| |||| Sbjct 556466 AATGGGACGGTGACGCATGTTGCTGTTACGAGCCTCCTGAACGGGGTAGTGGTTGACGTC 556525 Query 244570 GATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTC 244629 || | |||||| | ||||||| | | || ||| || ||| || ||||| Sbjct 556526 AATGATCTTGTTCAAGTTGCGGACAACAACCTGGGTGACTTCATGGAGCTTCTTGAAGTC 556585 Query 244630 GTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGC 244689 |||| | ||||| | | || | || || | || || | | || Sbjct 556586 ATACTTGC------CCTCGTTG-TAGTCA-----ACGAAAGCAGGAAGAGCAAGGGAAGC 556633 Query 244690 CAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTT 244749 ||||||||||| || ||||| || | | ||||| || |||||| ||||||||||| Sbjct 556634 AAGGTTGCAGACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCAGAGGTT 556693 Query 244750 ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTA 244809 || |||||| |||| || || || ||| |||| ||||||| ||||||||| Sbjct 556694 GGAGCTGCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTA 556753 Query 244810 GAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCT 244869 |||||||||||| || |||||| ||| || | |||| | || ||| || | | Sbjct 556754 GAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGCGTACCAAAGCTTCTG 556813 Query 244870 AGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA 244929 |||||||| ||| |||| | |||||| |||||||| ||||||||||||||| Sbjct 556814 AGCCTTGATGGTCTTGCGGCCACGGCCCTCAGCCTCGTACTTCTCGTACAGGGCCTCGAA 556873 Query 244930 CTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTC 244989 || || || ||| | ||||| |||||| ||||||||||| ||||||| Sbjct 556874 TTCCTCACCGTAGCAATCGGCAAGGCCAGGGCACTCGTTGGGGCACATGAGGGTCCACTC 556933 Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049 ||| | || || | || |||||| || ||||| |||||||| || ||||||| || Sbjct 556934 TCCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAAGAGATC 556993 Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109 | || | || ||| ||| ||||| | || || | || |||||||| || Sbjct 556994 ACGGGCACGGACTTCTTCCTTACCATGATTCTTGCGAAGGTCAAGGAACTCAAAGACATC 557053 Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169 ||||||||||||| | ||||| |||| ||| ||||| |||||||| || || ||||| Sbjct 557054 TGCGTGCCAGGGCTCAAGGTAGATGGCGAAGGCACCGGGACGCTTGTTACCACCTTGGTC 557113 Query 245170 CACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGT 245225 | | | || ||| |||||||| |||| | || | | ||||| ||| Sbjct 557114 GA----CGTAGCGGGCGGTGTTGTTGAAGACACGCAACATGGGGATGACACCGTTGGAGG 557169 Query 245226 GGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCC---TGAGGTTGCTGATGGACATGC 245282 |||||||| || |||||| | ||| || | | || ||| | | || | | Sbjct 557170 TACCGTTGGTACCAGCGATGTAAGAGCCTGTGGCACGGATGCGGTGGGCGTTG---AGAC 557226 Query 245283 CTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCT 245342 | | || || || ||||||||| | ||| ||| |||||| ||| || || |||| Sbjct 557227 CAATGCCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTATCGTAAATACCCT 557286 Query 245343 CCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGC 245402 | ||||| ||| |||||||| | || |||||||| || |||||| || ||| | | Sbjct 557287 CAATGCTATCCTCCTTCATGTCAACCAAGAAGCAGGAAGAAAGCTGGCACTGGGGTGTAC 557346 Query 245403 ACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACG 245462 | |||||| || || ||| ||| ||||| ||| | | | || | || ||| | Sbjct 557347 CGGCGTTGAAGAGGGTAGGGGAGGCATGGGTGAAGAACTTGTTAGACATGAGGTTGTAGG 557406 Query 245463 TCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGT 245522 ||| ||| | | ||||||||||| || || | ||| ||||||| ||| Sbjct 557407 TCTCGAGAACACGCTCGATGTTGTCACCCCAAATACCGACAGCGACTCTCATGATCATGT 557466 Query 245523 GCTGGGGCGTCTCGATGGGTCCCTCGGGTC--CCTTGAGCATGTAGGAGCGCTCGAGCGT 245580 ||||||| ||||| | | | ||| |||||||| ||| |||||||| || || Sbjct 557467 GCTGGGGACGCTCGA--CGATCTTGCCGTCAATCTTGAGCAGGTATGAGCGCTCAAGAGT 557524 Query 245581 CTTGAACCCAAAGTACGAGTAGCCAAAGTC 245610 |||||| || |||||| |||| ||||| Sbjct 557525 CTTGAAGCCGAAGTACTGGTAGTTGAAGTC 557554 Score = 363 bits (402), Expect = 3e-95 Identities = 616/876 (70%), Gaps = 30/876 (3%) Strand=Plus/Plus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344 ||| || |||| || |||||| |||||||||||||| || ||| |||||| ||| Sbjct 3938996 ATCAAGTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACAGCC 3939055 Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGA 42400 || || || || || ||||||| | || | | ||| || |||| | || |||| Sbjct 3939056 GAAGAAATCGATCTTTCCAAGGAT-CTGCACGATTGGAACAACCGTCTCAACGATGACGA 3939114 Query 42401 AAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGA 42460 || | ||| || |||| || |||||||| |||||||||||||| || || || || Sbjct 3939115 GAAATACTTCATCTCCCACATTCTTGCCTTCTTTGCCGCCTCTGACGGTATTGTTAACGA 3939174 Query 42461 GAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGG 42520 |||||| | | ||| || ||||| ||| |||| |||||||||||||| Sbjct 3939175 GAACCTTCTCGAGCGCTTCTCCAACGAGGTCCAGATTCCCGAGGGTCGCTGCTTCTACGG 3939234 Query 42521 CTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACAC 42577 |||||||| || |||||| | ||||||||| ||| || ||||| | | || Sbjct 3939235 TTTCCAGATCATGATGGAGAACATCCACTCTGAGACATACTCC---CTGCTTATTGATAC 3939291 Query 42578 GTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTG 42637 ||| || ||| || | |||| | || ||||| ||||| ||||| || ||||| Sbjct 3939292 CTACGTCAAGGAGCCTACCCAGCGCACATACCTCTTCAACGCCATTGAGACCATTCCCTG 3939351 Query 42638 CATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCG 42696 ||| |||||||| |||||||| || || |||||| | | || | | || || | Sbjct 3939352 TATCCGCAAGAAGGCCGACTGGGCCCTGAAGTGGATCTCT-GACAAGAACTCTACCTTTG 3939410 Query 42697 GCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCT 42756 || | || || |||||| | ||||||||||| ||||||||||| || ||||| |||| Sbjct 3939411 CTCAGCGTCTCGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGTGCCTTTGCCT 3939470 Query 42757 CCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTC 42815 ||||||||||||||||| || ||| || |||||||| || |||||||| ||||| ||| Sbjct 3939471 CCATCTTCTGGCTCAAGAAGCGCGGTCTC-ATGCCCGGTCTGACCTTCTCCAACGAGCTC 3939529 Query 42816 ATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC 42875 ||| | |||||||| || || | |||||||||||||| ||| ||| ||||||| Sbjct 3939530 ATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCCTTCTGCACTC---CCACCTC 3939586 Query 42876 AGGCACAAGC---CCTCGAAGGAG--CGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 | |||| | || |||||| | |||| ||||||||| || || || | Sbjct 3939587 A---ACAACCGTGCCAGCAAGGAGGTCATTGCCGG--CATCATCACTGACGCTGTCACCA 3939641 Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACC 42990 | ||| |||||||||| || || | || || | ||| ||||||||||| | ||| Sbjct 3939642 TTGAGCAGGAGTTCCTTACCGAGGCTCTTCCTTGCGCTCTGCTCGGCATGAACGCCAACC 3939701 Query 42991 TCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGC 43049 ||||| ||||||| ||| |||||| || | |||||| || | ||| || Sbjct 3939702 TCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTCGTCGCTCTTGGCAACGAGA 3939761 Query 43050 CGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAG 43109 | | ||||| | | |||||||||||| |||||||||||||| | | |||||| Sbjct 3939762 AG-ATTTACAAGTCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAG 3939820 Query 43110 ACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 |||||||| ||||||||||| || | ||| |||||| Sbjct 3939821 ACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACCAG 3939856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338893089760