Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 3e-20
>seq1
Length=8525130
Score = 114 bits (126), Expect = 3e-20
Identities = 346/530 (65%), Gaps = 21/530 (4%)
Strand=Plus/Plus
Query 243208 CTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAAG 243267
|| ||| ||||||| || | |||||| | | || ||||| | ||||| | ||||
Sbjct 3939323 CTCTTCAACGCCATTGAGACCATTCCCTGTATCCGCAAGAAGGCCGACTGGGCCCTGAAG 3939382
Query 243268 TGGCT--------AGAACCCGGTAAATCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCG 243319
||| | ||||| | || | |||||| |||||||||| |||| | ||
Sbjct 3939383 TGGATCTCTGACAAGAACTC--TA---CCTTTGCTCAGCGTCTCGTTGCCTTTGCTGCCG 3939437
Query 243320 TTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTG 243379
| || ||||| | || || || || | ||||||| ||||| ||| |||
Sbjct 3939438 TCGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGTC 3939497
Query 243380 TGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAAC 243439
| ||||| || || | || |||||| ||||| ||| |||||||| ||||||
Sbjct 3939498 TCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCG 3939557
Query 243440 AGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAAGC-TACCATTCGAAACGGTCAAA 243498
| || | ||| || | || | ||| ||||| | | ||| | | |||||
Sbjct 3939558 ACTTTGCCTGCCTTCTGCACTCCCACCTC---AACAACCGTGCCAG-CAAGGAGGTCATT 3939613
Query 243499 CAA---ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCA 243555
|||||||| || || || | || |||| ||| || ||| ||| ||||
Sbjct 3939614 GCCGGCATCATCACTGACGCTGTCACCATTGAGCAGGAGTTCCTTACCGAGGCTCTTCCT 3939673
Query 243556 TGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGAC 243615
||| || | ||||||||| | | |||||| |||||||| || ||||| || ||
Sbjct 3939674 TGCGCTCTGCTCGGCATGAACGCCAACCTCATGAAGCAGTACATTGAGTTCGTCGCTGAT 3939733
Query 243616 CGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTT 243675
|| | || |||| ||||| | ||||| | ||||| |||| |||||||| | |||
Sbjct 3939734 CGTCTCCTCGTCGCTCTTGGCAACGAGAAGATTTACAAGTCCACCAACCCCTTCGACTTC 3939793
Query 243676 ATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725
|||||| ||| || ||| || || || ||||||||||| ||||||||
Sbjct 3939794 ATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGT 3939843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879632603100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |