Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 167 3e-36 >seq1 Length=8525130 Score = 167 bits (184), Expect = 3e-36 Identities = 536/820 (65%), Gaps = 29/820 (4%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || ||||| ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 3939853 GTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCAT 3939794 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 125877 || || || ||||| | || || |||| | |||| ||||||||| Sbjct 3939793 GAAGTCGAAGGGGTTGGTGGACTTGTAAATCTTCTCGTTGCCAAGAGCGACGAGGAGACG 3939734 Query 125878 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 125937 ||| | |||| |||||||||||| ||| | | |||||| |||| || || Sbjct 3939733 ATCAGCGACGAACTCAATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGCAGAGCGCA 3939674 Query 125938 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGTG 125997 || || || || | |||| ||| |||||| || || || | |||| || Sbjct 3939673 AGGAAGAGCCTCGGTAAGGAACTCCTGCTCAATGGTGACAGCGTCAGTGATGATGCCGGC 3939614 Query 125998 AATGGTGTCCACCC---CAGGTCTATTGCGCAA--AGTCTTGAAGAGTTCCACGGCAAAC 126052 |||| ||| | || | | ||| | ||| |||| || |||||| Sbjct 3939613 AATGACCTCCTTGCTGGCACGGTTGTTGAGGTGGGAGTGCAGAAGG----CA-GGCAAAG 3939559 Query 126053 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATG 126112 || ||| |||||||||||||| |||||||| || || |||||| ||| || |||||| Sbjct 3939558 TCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATG 3939499 Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172 ||||| |||||||| | |||||| || | ||| | ||| ||||||||||| ||||| Sbjct 3939498 AGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAGATACCCTCG 3939439 Query 126173 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA---AACCAC 126229 || || || |||| |||||||| |||||||| || || ||||| | |||| Sbjct 3939438 ACGGCAGCAAAGGCAACGAGACGCTGAGCAAAGG---TAGAGTTCTTGTCAGAGATCCAC 3939382 Query 126230 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGT 126289 |||| ||||| | ||||| || |||||| || | ||||| || || | ||||| Sbjct 3939381 TTCAGGGCCCAGTCGGCCTTCTTGCGGATACAGGGAATGGTCTCAATGGCGTTGAAGAGG 3939322 Query 126290 TCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCG 126349 | | | | || || |||| ||| |||| || || || ||||| || | Sbjct 3939321 TATGTGCGCTGGGTAGGCTCCTTGACGTAGGTATCAATAAGCAGGGAGTATGTCTCAGAG 3939262 Query 126350 TGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTAC 126408 |||| | | ||| || | ||| | ||||||| |||| | ||| ||||| || Sbjct 3939261 TGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGACCCTCGGGAATCTGGAC 3939203 Query 126409 CTCATCGGCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAA 126467 ||| | || | || | | | | ||||| |||||| || || || | ||||| | Sbjct 3939202 CTCGTTGG-AGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCAGAGGCGGCAAAGA 3939144 Query 126468 ACGCCAGGATAT---ACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 126521 | || || || | | | | | |||||| ||| ||||| | || | ||||| | Sbjct 3939143 AGGCAAGAATGTGGGAGATGAAGTATTTCTCGTCA---TCGTTGAGACGGTTGTTCCAAT 3939087 Query 126522 CGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||| |||||||| || ||||| | || || || ||||| Sbjct 3939086 CGTGCAGATCCTTGGAAAGATCGATTTCTTCGGCTGTCCA 3939047 Score = 165 bits (182), Expect = 1e-35 Identities = 653/1022 (64%), Gaps = 14/1022 (1%) Strand=Plus/Plus Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974 |||||||| || | | || | | | || || |||| ||||| ||||| ||||||||| Sbjct 556068 AACTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGAAGTGTAGGGCTCGAAGCACTCA 556127 Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034 ||||| || | || || | ||| || || || |||||||| || | | | ||| Sbjct 556128 TTGTTGCCAAGAATCTGCGAGGTAGATGCAGTAGGCATGGGAGCAAGCAACAAAGAGTTG 556187 Query 114035 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC 114094 |||| ||| | ||| | | | ||||||||| ||||| || || | | | | Sbjct 556188 CGGATACCGTGCTCCTTGACCTGCTCCTTGAGGCTATCCCACTCCCAGAGGTCGCTGGGC 556247 Query 114095 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTC 114154 | | | |||||| || || ||||||||||| | ||||| || || |||| || || Sbjct 556248 TTGACATTCCACATGTCGAATTGGAGGATACCCTCAGAGGCGGGAGAGCCCTTGAAAGTA 556307 Query 114155 TCGTATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATAC 114211 ||| || ||||| ||| ||||| | | ||| || || ||| ||||| || Sbjct 556308 GAGTAGGGACCCTCTTCCTTGGCCAACTGCACAGAG---GCAGTGACGGCAGCGTGGTAG 556364 Query 114212 ATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGG 114271 || ||||| ||||| | |||| | ||||| ||| || || | ||| || Sbjct 556365 ATGGTCTCGAAAATCTGCTTGTTCAGCTCACGAGCCTCAGGGGACTCGAAGGGGAGACGT 556424 Query 114272 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 114331 | || | || || ||||| || ||||||| ||||| || || || | ||| Sbjct 556425 AGAGCGAGGAAGGCGTCAGCAAGACCCTGAACACCGACACCAATGGGACGGTGACGCATG 556484 Query 114332 TTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTT 114391 || || ||||| || ||||| || || || || | | | || | || Sbjct 556485 TTGCTGTTACGAGCCTCCTGAACGGGGTAGTGGTTGACGTCAATGATCTTGTTCAAGTTG 556544 Query 114392 TTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA 114451 | ||||||| |||| |||||| ||||| | | | ||| | ||| ||| | Sbjct 556545 CGGACAACAACCTGGGTGACTTCATGGAGCTTCTTGAAGTCATACTTGCC---CTCGTTG 556601 Query 114452 TTGACAT---ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508 | | || | |||||| || | || || || || || |||| | |||||| Sbjct 556602 TAGTCAACGAAAGCAGGAAGAGCAAGGGAAGCAAGGTTGCAGACAGCGACCTCATCAGGG 556661 Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568 || |||||| ||||| || || || | || || || ||||| ||||||||||| Sbjct 556662 GCACAGTACTCGATAATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTACCCAAGTTCTTC 556721 Query 114569 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628 || || ||| ||| || |||||||| |||||| | || | || ||||| || Sbjct 556722 TGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTC 556781 Query 114629 TGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCC 114687 || | || || || || | ||| | | || | | || | | || | | | || || Sbjct 556782 TGAGCCTCAAGGATGGCGTACCAAAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCC 556840 Query 114688 CTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 114747 ||| |||||||||| ||| ||||| || || || ||||| | || | || || Sbjct 556841 CTCAGCCTCGTACTTCTCGTACAGGGCCTCGAATTCCTCACCGTAGCAATCGGCAAGGCC 556900 Query 114748 TGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAA 114807 || || | ||||| | ||| | ||| | || || |||||||||||||||||| Sbjct 556901 AGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAA 556960 Query 114808 GAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 114867 || || || ||||||||||| ||||||||| || || ||||||| | || || Sbjct 556961 AAGATCGGGAATCCAGAGAGCAAGGAAGAGATCACGGGCACGGACTTCTTCCTTACCATG 557020 Query 114868 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 114927 ||| || | || | || || | || ||| |||||||| || || ||||| | || Sbjct 557021 ATTCTTGCGAAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGC 557080 Query 114928 GA 114929 || Sbjct 557081 GA 557082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353405860080