Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1 246 3e-60 >seq1 Length=8525130 Score = 246 bits (272), Expect = 3e-60 Identities = 1070/1672 (64%), Gaps = 38/1672 (2%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| ||||| ||| || ||||| |||||||| || ||| Sbjct 557548 AACTACCAGTACTTCGGCTTCAAGACTCTTGAGCGCTCATACCTGCTCAAGATTGACGGC 557489 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | | |||||| || || || || | ||| | ||||| |||| ||| || || Sbjct 557488 AAGATCGTCGAGCGTCCCCAGCACATGATCATGAGAGTCGCTGTCGGTATTTGGGGTGAC 557429 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 |||| | |||| | | | | || |||| ||||| | ||| ||| Sbjct 557428 AACATCGAGCGTGTTCTCGAGACCTACAACCTCATGTCTAACAAGTTCTTCACCCATGCC 557369 Query 93895 ACCCCGACCCTGTTCAACGCGGGGAC--CCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 |||| ||||| |||||||| || || ||| |||||| | | ||||| || ||| || Sbjct 557368 TCCCCTACCCTCTTCAACGCCGGTACACCCCAGTGCCA--GCTTTCTTCCTGCTTCTTGG 557311 Query 93953 T-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | ||| | |||| || ||| || |||| ||| | ||||||| |||||| | Sbjct 557310 TTGAC-ATGAAGGAGGATAGCATTGAGGGTATTTACGATACCCTCAAGACCTGTGCCATG 557252 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||||| || || || || || || ||| | |||| | | ||||||| || || Sbjct 557251 ATCTCCAAGATGGCTGGTGGCATTGGTCTCAACGCCCACCGCATCCGTGCCACAGGCTCT 557192 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 |||||| |||||||| || ||||||||||| || |||| ||| | || ||||||||| Sbjct 557191 TACATCGCTGGTACCAACGGTACCTCCAACGGTGTCATCCCCATGTTGCGTGTCTTCAAC 557132 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || |||||||| ||||| |||||| | | | ||| | ||||| |||| Sbjct 557131 AACACCGCCCGCTACGTCGACCAAGGTGGTAACAAGCGTCCCGGTGCCTTCGCCATCTAC 557072 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 || |||||||||||||| || || | ||| | ||||| || ||||| || || || Sbjct 557071 CTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTTCGCAAGAATCATGGTAAG 557012 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || | | ||| | || |||||| ||||||||| | || || ||||| ||||| Sbjct 557011 GAAGAAGTCCGTGCCCGTGATCTCTTCCTTGCTCTCTGGATTCCCGATCTTTTCATGAAG 556952 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 || || ||||| ||| | |||| || | || ||||| || || || || || || Sbjct 556951 CGTGTTGAGAAGAACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCC 556892 Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431 || | || | || || | | |||| | ||||| | ||||| | | Sbjct 556891 GATTGCTACGGTGAGGAATTCGAGGCCCTGTACGAGAAGTACGAGGCTGAGGGCCGTGGC 556832 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491 | ||| || | ||| |||||| ||| | ||| | || | ||| ||||| Sbjct 556831 CGCAAGACCATCAAGGCTCAGAAGCTTTGGTACGCCATCCTTGAGGCTCAGACCGAGACT 556772 Query 94492 GGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550 |||| |||| ||| | | |||||| | ||| |||| |||| ||||||| || || | Sbjct 556771 GGTAACCCCTTCATGCTCTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGAACTT 556713 Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610 || ||| ||||| || || ||||| |||||| ||||||| | | || || || Sbjct 556712 GGGTACCATCCGCAGCTCCAACCTCTGCACTGAGATTATCGAGTACTGTGCCCCTGATGA 556653 Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACAC 94670 | | ||||| || ||||| | ||| | || | ||||||| || ||||| Sbjct 556652 GGTCGCTGTCTGCAACCTTGCTTCCCTTGCTCTTCCTGCTTTCGT------TGACTACA- 556600 Query 94671 GTCTACTGCTTCGTTCGATCTGGAGGAGCT-TGTGAACT-TCGCGGGAAGGATGGTCTTG 94728 | | || || || | || |||| |||| | | | || | | ||| Sbjct 556599 -ACGAGGGC-AAGTATGACTTCAAGAAGCTCCATGAAGTCACCCAGGTTG--TTGTCCGC 556544 Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAAC 94788 ||| |||||| | | || ||| ||| ||||||||| | |||||| ||| ||| Sbjct 556543 AACTTGAACAAGATCATTGACGTCAACCACTACCCCGTTCAGGAGGCTCGTAACAGCAAC 556484 Query 94789 CTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATG 94848 || || || ||||| || |||| || |||||| | || ||||| | | | Sbjct 556483 ATGCGTCACCGTCCCATTGGTGTCGGTGTTCAGGGTCTTGCTGACGCCTTCCTCGCTCTA 556424 Query 94849 CGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATT 94908 ||||| |||| ||| || || || | |||| | | || ||||| | ||| Sbjct 556423 CGTCTCCCCTTCGAGTCCCCTGAGGCTCGTGAGCTGAACAAGCAGATTTTCGAGACCATC 556364 Query 94909 TATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAA 94968 || ||| ||| | | || || || ||||||| ||| | || || || Sbjct 556363 TACCACGCTGCCGTCACTGCCTCTGTGCAGTTGGCCA---AGGAAGAGGGTCCCTACTCT 556307 Query 94969 TCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAG 95028 | ||| || || ||| |||| || | || |||||| | ||| ||| ||| Sbjct 556306 ACTTTCAAGGGCTCTCCCGCCTCTGAGGGTATCCTCCAATTCGACATGTGGAATGTCAAG 556247 Query 95029 CCCTCGGGTCTGTACGACTGGGA-AG-CTCTACGCGCTGATGTTATCAAACACGGTGTGA 95086 ||| | || | || ||||| || ||| | | || | || | | |||||| | Sbjct 556246 CCCAGCGACCTCTGGGAGTGGGATAGCCTCAAGGAGC--AGGTCAAGGAGCACGGTATCC 556189 Query 95087 AAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACA 95146 ||| | || | | || |||||||| || || || || ||||||| |||||||||| Sbjct 556188 GCAACTCTTTGTTGCTTGCTCCCATGCCTACTGCATCTACCTCGCAGATTCTTGGCAACA 556129 Query 95147 ACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAAT 95206 | |||| ||||| |||| ||| |||||| | ||| | | || || | || || || | Sbjct 556128 ATGAGTGCTTCGAGCCCTACACTTCCAACATTTACCAGCGCCGTGTCTTGGCTGGTGAGT 556069 Query 95207 TCCCCGTCATCAACAAGCACCTCCT-ACGGGACCTGACGTCTCTGGGTGTGTGGGGTGAC 95265 ||| || | ||| | || | || | || || | |||| ||||| ||| Sbjct 556068 TCCAGGTTGTTAACCCCTGGTTGCTCAAGGATCTTGTCGAC-ATGGGCTTGTGGTCTGAT 556010 Query 95266 AAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAAT 95321 | ||||||| | |||| | ||||| || | ||||||||||| | || Sbjct 556009 GCCATGAAGAACCGTATCATTGCT----GAGAACGGATCTATTCAGAACATCCCCAACAT 555954 Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 || | ||||||||||| || |||||||| || |||||||| | |||||| Sbjct 555953 CCCTGCCGACATCAAGGCCCTTTACAAGACTGTTTGGGAGATTTCCCAGCGC 555902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723039214960