Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq1 246 3e-60
>seq1
Length=8525130
Score = 246 bits (272), Expect = 3e-60
Identities = 1070/1672 (64%), Gaps = 38/1672 (2%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| ||||| ||| || ||||| |||||||| || |||
Sbjct 557548 AACTACCAGTACTTCGGCTTCAAGACTCTTGAGCGCTCATACCTGCTCAAGATTGACGGC 557489
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | | |||||| || || || || | ||| | ||||| |||| ||| || ||
Sbjct 557488 AAGATCGTCGAGCGTCCCCAGCACATGATCATGAGAGTCGCTGTCGGTATTTGGGGTGAC 557429
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
|||| | |||| | | | | || |||| ||||| | ||| |||
Sbjct 557428 AACATCGAGCGTGTTCTCGAGACCTACAACCTCATGTCTAACAAGTTCTTCACCCATGCC 557369
Query 93895 ACCCCGACCCTGTTCAACGCGGGGAC--CCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952
|||| ||||| |||||||| || || ||| |||||| | | ||||| || ||| ||
Sbjct 557368 TCCCCTACCCTCTTCAACGCCGGTACACCCCAGTGCCA--GCTTTCTTCCTGCTTCTTGG 557311
Query 93953 T-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011
| ||| | |||| || ||| || |||| ||| | ||||||| |||||| |
Sbjct 557310 TTGAC-ATGAAGGAGGATAGCATTGAGGGTATTTACGATACCCTCAAGACCTGTGCCATG 557252
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071
||||| || || || || || || ||| | |||| | | ||||||| || ||
Sbjct 557251 ATCTCCAAGATGGCTGGTGGCATTGGTCTCAACGCCCACCGCATCCGTGCCACAGGCTCT 557192
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
|||||| |||||||| || ||||||||||| || |||| ||| | || |||||||||
Sbjct 557191 TACATCGCTGGTACCAACGGTACCTCCAACGGTGTCATCCCCATGTTGCGTGTCTTCAAC 557132
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || |||||||| ||||| |||||| | | | ||| | ||||| ||||
Sbjct 557131 AACACCGCCCGCTACGTCGACCAAGGTGGTAACAAGCGTCCCGGTGCCTTCGCCATCTAC 557072
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|| |||||||||||||| || || | ||| | ||||| || ||||| || || ||
Sbjct 557071 CTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTTCGCAAGAATCATGGTAAG 557012
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| | | ||| | || |||||| ||||||||| | || || ||||| |||||
Sbjct 557011 GAAGAAGTCCGTGCCCGTGATCTCTTCCTTGCTCTCTGGATTCCCGATCTTTTCATGAAG 556952
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
|| || ||||| ||| | |||| || | || ||||| || || || || || ||
Sbjct 556951 CGTGTTGAGAAGAACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCC 556892
Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431
|| | || | || || | | |||| | ||||| | ||||| | |
Sbjct 556891 GATTGCTACGGTGAGGAATTCGAGGCCCTGTACGAGAAGTACGAGGCTGAGGGCCGTGGC 556832
Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491
| ||| || | ||| |||||| ||| | ||| | || | ||| |||||
Sbjct 556831 CGCAAGACCATCAAGGCTCAGAAGCTTTGGTACGCCATCCTTGAGGCTCAGACCGAGACT 556772
Query 94492 GGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550
|||| |||| ||| | | |||||| | ||| |||| |||| ||||||| || || |
Sbjct 556771 GGTAACCCCTTCATGCTCTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGAACTT 556713
Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610
|| ||| ||||| || || ||||| |||||| ||||||| | | || || ||
Sbjct 556712 GGGTACCATCCGCAGCTCCAACCTCTGCACTGAGATTATCGAGTACTGTGCCCCTGATGA 556653
Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACAC 94670
| | ||||| || ||||| | ||| | || | ||||||| || |||||
Sbjct 556652 GGTCGCTGTCTGCAACCTTGCTTCCCTTGCTCTTCCTGCTTTCGT------TGACTACA- 556600
Query 94671 GTCTACTGCTTCGTTCGATCTGGAGGAGCT-TGTGAACT-TCGCGGGAAGGATGGTCTTG 94728
| | || || || | || |||| |||| | | | || | | |||
Sbjct 556599 -ACGAGGGC-AAGTATGACTTCAAGAAGCTCCATGAAGTCACCCAGGTTG--TTGTCCGC 556544
Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAAC 94788
||| |||||| | | || ||| ||| ||||||||| | |||||| ||| |||
Sbjct 556543 AACTTGAACAAGATCATTGACGTCAACCACTACCCCGTTCAGGAGGCTCGTAACAGCAAC 556484
Query 94789 CTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATG 94848
|| || || ||||| || |||| || |||||| | || ||||| | | |
Sbjct 556483 ATGCGTCACCGTCCCATTGGTGTCGGTGTTCAGGGTCTTGCTGACGCCTTCCTCGCTCTA 556424
Query 94849 CGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATT 94908
||||| |||| ||| || || || | |||| | | || ||||| | |||
Sbjct 556423 CGTCTCCCCTTCGAGTCCCCTGAGGCTCGTGAGCTGAACAAGCAGATTTTCGAGACCATC 556364
Query 94909 TATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAA 94968
|| ||| ||| | | || || || ||||||| ||| | || || ||
Sbjct 556363 TACCACGCTGCCGTCACTGCCTCTGTGCAGTTGGCCA---AGGAAGAGGGTCCCTACTCT 556307
Query 94969 TCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAG 95028
| ||| || || ||| |||| || | || |||||| | ||| ||| |||
Sbjct 556306 ACTTTCAAGGGCTCTCCCGCCTCTGAGGGTATCCTCCAATTCGACATGTGGAATGTCAAG 556247
Query 95029 CCCTCGGGTCTGTACGACTGGGA-AG-CTCTACGCGCTGATGTTATCAAACACGGTGTGA 95086
||| | || | || ||||| || ||| | | || | || | | |||||| |
Sbjct 556246 CCCAGCGACCTCTGGGAGTGGGATAGCCTCAAGGAGC--AGGTCAAGGAGCACGGTATCC 556189
Query 95087 AAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACA 95146
||| | || | | || |||||||| || || || || ||||||| ||||||||||
Sbjct 556188 GCAACTCTTTGTTGCTTGCTCCCATGCCTACTGCATCTACCTCGCAGATTCTTGGCAACA 556129
Query 95147 ACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAAT 95206
| |||| ||||| |||| ||| |||||| | ||| | | || || | || || || |
Sbjct 556128 ATGAGTGCTTCGAGCCCTACACTTCCAACATTTACCAGCGCCGTGTCTTGGCTGGTGAGT 556069
Query 95207 TCCCCGTCATCAACAAGCACCTCCT-ACGGGACCTGACGTCTCTGGGTGTGTGGGGTGAC 95265
||| || | ||| | || | || | || || | |||| ||||| |||
Sbjct 556068 TCCAGGTTGTTAACCCCTGGTTGCTCAAGGATCTTGTCGAC-ATGGGCTTGTGGTCTGAT 556010
Query 95266 AAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAAT 95321
| ||||||| | |||| | ||||| || | ||||||||||| | ||
Sbjct 556009 GCCATGAAGAACCGTATCATTGCT----GAGAACGGATCTATTCAGAACATCCCCAACAT 555954
Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373
|| | ||||||||||| || |||||||| || |||||||| | ||||||
Sbjct 555953 CCCTGCCGACATCAAGGCCCTTTACAAGACTGTTTGGGAGATTTCCCAGCGC 555902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723039214960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |