Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 123 2e-23 seq3 122 8e-23 seq7 98.7 9e-16 >seq1 Length=8525130 Score = 123 bits (136), Expect = 2e-23 Identities = 345/526 (66%), Gaps = 19/526 (4%) Strand=Plus/Plus Query 47061 GAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAA 47120 |||| ||| ||||| | |||| |||||||| |||||| |||||| || || | Sbjct 3939338 GAGACCATTCCCTGTATCCGCAAGAAGGCCGACTGGGCCCTGAAGTGGATCTCTGACAAG 3939397 Query 47121 AACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCG 47180 ||| || | || | ||| | | || || || ||||||||| |||||||||| Sbjct 3939398 AACTCTACCTTTGCTCAGCGTCTCGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCT 3939457 Query 47181 GGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTT 47240 || |||||| | || || | | || | || | |||||||| || || || Sbjct 3939458 GGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTGACCTTC 3939517 Query 47241 AGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCT-CT--AC 47297 ||||||||| ||||| | ||||| || || |||||| |||||||||| || || || Sbjct 3939518 TCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCCTTCTGCAC 3939577 Query 47298 TACAAC----ACTAGAGT-CGATCAAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTG 47352 | | || || | || | | ||| ||| || ||| || | || Sbjct 3939578 TCCCACCTCAACAACCGTGCCAGCAA-----GGAGGTCATTGCCGGCATCATCA------ 3939626 Query 47353 CCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGG 47412 | || || ||| |||||||| |||||| | |||||||||| || || | | | Sbjct 3939627 CTGACGCTGTCACCATTGAGCAGGAGTTCCTTACCGAGGCTCTTCCTTGCGCTCTGCTCG 3939686 Query 47413 GAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTC 47472 | |||||||| | | |||| ||||||| || || ||||| || || || ||||| Sbjct 3939687 GCATGAACGCCAACCTCATGAAGCAGTACATTGAGTTCGTCGCTGATCGTCTCCTCGTCG 3939746 Query 47473 AGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTT 47532 || | ||||||||| | || || || ||||| || ||| | ||||| | Sbjct 3939747 CTCTTGGCAACGAGAAGATTTACAAGTCCACCAACCCCTTCGACTTCATGGAGAACATCT 3939806 Query 47533 CGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 | || | |||||||||||||| ||||||||||| || ||||| || Sbjct 3939807 CCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTA 3939852 Score = 95.1 bits (104), Expect = 1e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| ||| | ||||| ||| || ||||| || |||||| ||||| Sbjct 1348136 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 1348077 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 | |||||||| || || || ||||||||||| ||| ||| || ||||| | ||| Sbjct 1348076 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 1348017 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 | |||||||| |||||| |||| ||| | || || || ||||| || || || ||| Sbjct 1348016 ATGGTGTCCGAGGACTCGACCTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTCACGAAA 1347957 >seq3 Length=4610873 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| |||||| || | |||||||| || ||||| ||||| |||| | Sbjct 3673420 CCACCACGGAGACGCAGCACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGCTC 3673479 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || || |||| | ||||||||||| ||||| Sbjct 3673480 AGAGTGCGACCGTCCTCGAGCTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGGG 3673539 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||| || ||| || ||||| | |||| ||||||| ||| ||| Sbjct 3673540 ATACCCTCCTTATCTTGGATCTTTGACTTGACATTGTCGATTGTGTCCGATGACTCAACT 3673599 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| || ||||| || ||||| || ||||| Sbjct 3673600 TCTAATGTAATAGTCTTGCCAGTAAGAGTCTTGACAAAGATTTGCAT 3673646 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| || || || || ||||| ||| | ||||| ||| || ||||| || || Sbjct 3673678 GTAGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCAAGCTGCTTGCCG 3673737 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | |||| |||||||| || ||||| ||||||||||||||| ||| ||| |||| Sbjct 3673738 GCAAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTG 3673797 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||||| | | ||| || |||| ||| | || || ||||||| ||| Sbjct 3673798 ACGTTG-TCAATAGTGTCGGAAGACTCAACCTCGAGGGTAATGGTCTTTCCGGTCAAAGT 3673856 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 3673857 CTTGACGAAGATCTGCAT 3673874 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||| ||||| || | ||||| ||| || ||||| || ||||| | Sbjct 3673227 CTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCAAGCTGCTTACCAGCAAA 3673286 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 ||| | || ||||| || ||||| || |||||||| ||| || ||| ||||| ||| Sbjct 3673287 GATAAGACGTTGCTGGTCAGGAGGAATACCCTCCTTATCCTGAATCTTCGACTTGACGTT 3673346 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 || ||| ||| || | | ||| || || | || | ||| |||||||| || || || | Sbjct 3673347 GT-CGATGGTATCAGAAGACTCAACCTCCAATGTGATCGTCTTGCCGGTGAGGGTCTTGA 3673405 Query 127101 CAAAAATCTGCAT 127113 | ||||||||||| Sbjct 3673406 CGAAAATCTGCAT 3673418 Score = 86.0 bits (94), Expect = 6e-12 Identities = 122/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||| |||||||| | ||||| ||| || ||||| || |||||| | Sbjct 3673911 CTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAA 3673970 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 |||| |||||||| || || || || |||||||||||| || || ||||| ||| Sbjct 3673971 AATCAGGCGCTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTT 3674030 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | || | |||||| | | ||| || |||| ||| | || |||||||| Sbjct 3674031 G-TCAATGGTGTCGGAAGACTCAACCTCGAGGGTAATGGTCTTGCCGGT 3674078 >seq7 Length=1200748 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||||| ||| || ||||| || ||| Sbjct 1041535 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCA 1041476 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| |||||||| || || || || |||||||| ||| ||| || |||| Sbjct 1041475 GCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTATCCTGGATCTTGGACTTG 1041416 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | | ||| || || | ||| | ||| || || || || || Sbjct 1041415 ACATTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTTCCCGTAAGGGTC 1041356 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 1041355 TTGACGAAAATCTGCAT 1041339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500645462240