Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 165 1e-35 >seq1 Length=8525130 Score = 165 bits (182), Expect = 1e-35 Identities = 572/878 (65%), Gaps = 31/878 (4%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || || || ||||||||||||||||| ||||| ||| | ||| ||| |||||||| Sbjct 3939853 GTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCAT 3939794 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 127350 || || || ||||| | || || |||| | |||| ||||||||| Sbjct 3939793 GAAGTCGAAGGGGTTGGTGGACTTGTAAATCTTCTCGTTGCCAAGAGCGACGAGGAGACG 3939734 Query 127351 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 127410 ||| | |||| |||||||||||| ||| | | |||||| |||| || || Sbjct 3939733 ATCAGCGACGAACTCAATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGCAGAGCGCA 3939674 Query 127411 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTG 127470 || || || || | |||| ||| ||||||| ||||| || | |||| || Sbjct 3939673 AGGAAGAGCCTCGGTAAGGAACTCCTGCTCAATGGTGACAGCGTCAGTGATGATGCCGGC 3939614 Query 127471 AATAGTGTCCACCC---CAGGTCTATTGCGTAA--AGTCTTGAAGAGTTCCACAGCAAAC 127525 ||| ||| | || | | ||| | ||| |||| || ||||| Sbjct 3939613 AATGACCTCCTTGCTGGCACGGTTGTTGAGGTGGGAGTGCAGAAGG----CAG-GCAAAG 3939559 Query 127526 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 127585 || ||| |||||||||||||| |||||||| || || |||||| |||||| |||||| Sbjct 3939558 TCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATG 3939499 Query 127586 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 127645 ||||| |||||||| | |||||| || | ||| | |||||||||||||| ||||| Sbjct 3939498 AGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAGATACCCTCG 3939439 Query 127646 ACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA---AACCAC 127702 || || || |||| ||||||| ||||||| || || | ||| | |||| Sbjct 3939438 ACGGCAGCAAAGGCAACGAGACGCTGAGCAAAGG---TAGAGTTCTTGTCAGAGATCCAC 3939382 Query 127703 TTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGT 127762 |||| ||||| | ||||| || |||||| || | ||||| || || | ||||| Sbjct 3939381 TTCAGGGCCCAGTCGGCCTTCTTGCGGATACAGGGAATGGTCTCAATGGCGTTGAAGAGG 3939322 Query 127763 TCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCG 127822 | | | | || || |||| ||| |||| || || || ||||| || | Sbjct 3939321 TATGTGCGCTGGGTAGGCTCCTTGACGTAGGTATCAATAAGCAGGGAGTATGTCTCAGAG 3939262 Query 127823 TGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTAC 127881 |||| | | ||| || | ||| | ||||||| |||| | ||| ||||| || Sbjct 3939261 TGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGACCCTCGGGAATCTGGAC 3939203 Query 127882 CTCATCGGCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAA 127940 ||| | || | || | | | | ||||| |||||| || || || | ||||| | Sbjct 3939202 CTCGTTGG-AGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCAGAGGCGGCAAAGA 3939144 Query 127941 ACGCCAGGATAT---ACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 127994 | || || || | | | | | |||||| ||| ||||| | || | ||||| | Sbjct 3939143 AGGCAAGAATGTGGGAGATGAAGTATTTCTCGTCA---TCGTTGAGACGGTTGTTCCAAT 3939087 Query 127995 CGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA-ATTGCTCATTTGAGCCTTC 128053 ||| |||||||| || ||||| | || || || ||||| | || | | |||||| Sbjct 3939086 CGTGCAGATCCTTGGAAAGATCGATTTCTTCGGCTGTCCAGAATGAGGCCTCG-GCCTTC 3939028 Query 128054 TTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAA 128091 || || | | ||||| | | | ||||| | |||||| Sbjct 3939027 TTGTACATCTGCCAGATCTCGTGGTACTTGATGGGGAA 3938990 Score = 150 bits (166), Expect = 2e-31 Identities = 652/1023 (64%), Gaps = 16/1023 (2%) Strand=Plus/Plus Query 115876 AACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCA 115935 |||||||| || | | || | | | || ||||||| ||||| ||||| ||||||||| Sbjct 556068 AACTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGAAGTGTAGGGCTCGAAGCACTCA 556127 Query 115936 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTG 115995 ||||| || | || || | || || || || |||||||| || | | | |||| Sbjct 556128 TTGTTGCCAAGAATCTGCGAGGTAGATGCAGTAGGCATGGGAGCAAGCAACAAAGAGTTG 556187 Query 115996 CGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC 116055 |||| ||| | || | | | ||||||||| ||||| || || | | | | Sbjct 556188 CGGATACCGTGCTCCTTGACCTGCTCCTTGAGGCTATCCCACTCCCAGAGGTCGCTGGGC 556247 Query 116056 TCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 116115 | | | |||||| || || ||||||||||| | || || || || |||| || || Sbjct 556248 TTGACATTCCACATGTCGAATTGGAGGATACCCTCAGAGGCGGGAGAGCCCTTGAAAGTA 556307 Query 116116 TCATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATAC 116172 || || ||||| ||| ||||| | | ||| || || ||| ||||| || Sbjct 556308 GAGTAGGGACCCTCTTCCTTGGCCAACTGCACAGAG---GCAGTGACGGCAGCGTGGTAG 556364 Query 116173 ATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGG 116232 || ||||| ||||| | |||| | ||||| ||| || || | |||||| Sbjct 556365 ATGGTCTCGAAAATCTGCTTGTTCAGCTCACGAGCCTCAGGGGACTCGAAGGGGAGACGT 556424 Query 116233 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 116292 | || | || || ||||| || ||||||| ||||| || || || | ||| Sbjct 556425 AGAGCGAGGAAGGCGTCAGCAAGACCCTGAACACCGACACCAATGGGACGGTGACGCATG 556484 Query 116293 TTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTT 116352 || || ||||| || ||||| || || || || | | | || | || Sbjct 556485 TTGCTGTTACGAGCCTCCTGAACGGGGTAGTGGTTGACGTCAATGATCTTGTTCAAGTTG 556544 Query 116353 TTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA 116412 | ||||||| |||| |||||| ||||| | | | ||| | ||| ||| | Sbjct 556545 CGGACAACAACCTGGGTGACTTCATGGAGCTTCTTGAAGTCATACTTGCC---CTCGTTG 556601 Query 116413 TTGACAT---ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 116469 | | || | |||||| || | || || || || || |||| | |||||| Sbjct 556602 TAGTCAACGAAAGCAGGAAGAGCAAGGGAAGCAAGGTTGCAGACAGCGACCTCATCAGGG 556661 Query 116470 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 116529 || |||||| ||||| || || || | || || || ||||| ||||||||||| Sbjct 556662 GCACAGTACTCGATAATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTACCCAAGTTCTTC 556721 Query 116530 TGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTT 116589 || || ||| ||| || |||||||||||||| | || | || ||||| || Sbjct 556722 TGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTC 556781 Query 116590 TGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCC 116648 || | || || || || | ||| | | || | | || | | || | | | || || Sbjct 556782 TGAGCCTCAAGGATGGCGTACCAAAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCC 556840 Query 116649 CTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCC 116707 ||| |||||||||| ||| |||||||| || || ||||| ||| || | || | Sbjct 556841 CTCAGCCTCGTACTTCTCGTACAGGGCCTCGAATTCCTCACCGT-AGCAATCGGCAAGGC 556899 Query 116708 CTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 116767 | || || | || || | ||| | ||| | || || |||||| |||||||||| Sbjct 556900 CAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGA 556959 Query 116768 AGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 116827 | || || || |||||||| || ||||||||| || || ||||||| | || | Sbjct 556960 AAAGATCGGGAATCCAGAGAGCAAGGAAGAGATCACGGGCACGGACTTCTTCCTTACCAT 557019 Query 116828 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 116887 |||| || | || | || || | || ||| |||||||| || || ||||| | | Sbjct 557020 GATTCTTGCGAAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGG 557079 Query 116888 CGA 116890 ||| Sbjct 557080 CGA 557082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507000610160