Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1 165 1e-35
>seq1
Length=8525130
Score = 165 bits (182), Expect = 1e-35
Identities = 572/878 (65%), Gaps = 31/878 (4%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
||| || || || ||||||||||||||||| ||||| ||| | ||| ||| ||||||||
Sbjct 3939853 GTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCAT 3939794
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 127350
|| || || ||||| | || || |||| | |||| |||||||||
Sbjct 3939793 GAAGTCGAAGGGGTTGGTGGACTTGTAAATCTTCTCGTTGCCAAGAGCGACGAGGAGACG 3939734
Query 127351 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 127410
||| | |||| |||||||||||| ||| | | |||||| |||| || ||
Sbjct 3939733 ATCAGCGACGAACTCAATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGCAGAGCGCA 3939674
Query 127411 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTG 127470
|| || || || | |||| ||| ||||||| ||||| || | |||| ||
Sbjct 3939673 AGGAAGAGCCTCGGTAAGGAACTCCTGCTCAATGGTGACAGCGTCAGTGATGATGCCGGC 3939614
Query 127471 AATAGTGTCCACCC---CAGGTCTATTGCGTAA--AGTCTTGAAGAGTTCCACAGCAAAC 127525
||| ||| | || | | ||| | ||| |||| || |||||
Sbjct 3939613 AATGACCTCCTTGCTGGCACGGTTGTTGAGGTGGGAGTGCAGAAGG----CAG-GCAAAG 3939559
Query 127526 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 127585
|| ||| |||||||||||||| |||||||| || || |||||| |||||| ||||||
Sbjct 3939558 TCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATG 3939499
Query 127586 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 127645
||||| |||||||| | |||||| || | ||| | |||||||||||||| |||||
Sbjct 3939498 AGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAGATACCCTCG 3939439
Query 127646 ACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA---AACCAC 127702
|| || || |||| ||||||| ||||||| || || | ||| | ||||
Sbjct 3939438 ACGGCAGCAAAGGCAACGAGACGCTGAGCAAAGG---TAGAGTTCTTGTCAGAGATCCAC 3939382
Query 127703 TTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGT 127762
|||| ||||| | ||||| || |||||| || | ||||| || || | |||||
Sbjct 3939381 TTCAGGGCCCAGTCGGCCTTCTTGCGGATACAGGGAATGGTCTCAATGGCGTTGAAGAGG 3939322
Query 127763 TCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCG 127822
| | | | || || |||| ||| |||| || || || ||||| || |
Sbjct 3939321 TATGTGCGCTGGGTAGGCTCCTTGACGTAGGTATCAATAAGCAGGGAGTATGTCTCAGAG 3939262
Query 127823 TGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTAC 127881
|||| | | ||| || | ||| | ||||||| |||| | ||| ||||| ||
Sbjct 3939261 TGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGACCCTCGGGAATCTGGAC 3939203
Query 127882 CTCATCGGCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAA 127940
||| | || | || | | | | ||||| |||||| || || || | ||||| |
Sbjct 3939202 CTCGTTGG-AGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCAGAGGCGGCAAAGA 3939144
Query 127941 ACGCCAGGATAT---ACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 127994
| || || || | | | | | |||||| ||| ||||| | || | ||||| |
Sbjct 3939143 AGGCAAGAATGTGGGAGATGAAGTATTTCTCGTCA---TCGTTGAGACGGTTGTTCCAAT 3939087
Query 127995 CGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA-ATTGCTCATTTGAGCCTTC 128053
||| |||||||| || ||||| | || || || ||||| | || | | ||||||
Sbjct 3939086 CGTGCAGATCCTTGGAAAGATCGATTTCTTCGGCTGTCCAGAATGAGGCCTCG-GCCTTC 3939028
Query 128054 TTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAA 128091
|| || | | ||||| | | | ||||| | ||||||
Sbjct 3939027 TTGTACATCTGCCAGATCTCGTGGTACTTGATGGGGAA 3938990
Score = 150 bits (166), Expect = 2e-31
Identities = 652/1023 (64%), Gaps = 16/1023 (2%)
Strand=Plus/Plus
Query 115876 AACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCA 115935
|||||||| || | | || | | | || ||||||| ||||| ||||| |||||||||
Sbjct 556068 AACTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGAAGTGTAGGGCTCGAAGCACTCA 556127
Query 115936 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTG 115995
||||| || | || || | || || || || |||||||| || | | | ||||
Sbjct 556128 TTGTTGCCAAGAATCTGCGAGGTAGATGCAGTAGGCATGGGAGCAAGCAACAAAGAGTTG 556187
Query 115996 CGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC 116055
|||| ||| | || | | | ||||||||| ||||| || || | | | |
Sbjct 556188 CGGATACCGTGCTCCTTGACCTGCTCCTTGAGGCTATCCCACTCCCAGAGGTCGCTGGGC 556247
Query 116056 TCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 116115
| | | |||||| || || ||||||||||| | || || || || |||| || ||
Sbjct 556248 TTGACATTCCACATGTCGAATTGGAGGATACCCTCAGAGGCGGGAGAGCCCTTGAAAGTA 556307
Query 116116 TCATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATAC 116172
|| || ||||| ||| ||||| | | ||| || || ||| ||||| ||
Sbjct 556308 GAGTAGGGACCCTCTTCCTTGGCCAACTGCACAGAG---GCAGTGACGGCAGCGTGGTAG 556364
Query 116173 ATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGG 116232
|| ||||| ||||| | |||| | ||||| ||| || || | ||||||
Sbjct 556365 ATGGTCTCGAAAATCTGCTTGTTCAGCTCACGAGCCTCAGGGGACTCGAAGGGGAGACGT 556424
Query 116233 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 116292
| || | || || ||||| || ||||||| ||||| || || || | |||
Sbjct 556425 AGAGCGAGGAAGGCGTCAGCAAGACCCTGAACACCGACACCAATGGGACGGTGACGCATG 556484
Query 116293 TTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTT 116352
|| || ||||| || ||||| || || || || | | | || | ||
Sbjct 556485 TTGCTGTTACGAGCCTCCTGAACGGGGTAGTGGTTGACGTCAATGATCTTGTTCAAGTTG 556544
Query 116353 TTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA 116412
| ||||||| |||| |||||| ||||| | | | ||| | ||| ||| |
Sbjct 556545 CGGACAACAACCTGGGTGACTTCATGGAGCTTCTTGAAGTCATACTTGCC---CTCGTTG 556601
Query 116413 TTGACAT---ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 116469
| | || | |||||| || | || || || || || |||| | ||||||
Sbjct 556602 TAGTCAACGAAAGCAGGAAGAGCAAGGGAAGCAAGGTTGCAGACAGCGACCTCATCAGGG 556661
Query 116470 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 116529
|| |||||| ||||| || || || | || || || ||||| |||||||||||
Sbjct 556662 GCACAGTACTCGATAATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTACCCAAGTTCTTC 556721
Query 116530 TGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTT 116589
|| || ||| ||| || |||||||||||||| | || | || ||||| ||
Sbjct 556722 TGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTC 556781
Query 116590 TGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCC 116648
|| | || || || || | ||| | | || | | || | | || | | | || ||
Sbjct 556782 TGAGCCTCAAGGATGGCGTACCAAAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCC 556840
Query 116649 CTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCC 116707
||| |||||||||| ||| |||||||| || || ||||| ||| || | || |
Sbjct 556841 CTCAGCCTCGTACTTCTCGTACAGGGCCTCGAATTCCTCACCGT-AGCAATCGGCAAGGC 556899
Query 116708 CTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 116767
| || || | || || | ||| | ||| | || || |||||| ||||||||||
Sbjct 556900 CAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGA 556959
Query 116768 AGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 116827
| || || || |||||||| || ||||||||| || || ||||||| | || |
Sbjct 556960 AAAGATCGGGAATCCAGAGAGCAAGGAAGAGATCACGGGCACGGACTTCTTCCTTACCAT 557019
Query 116828 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 116887
|||| || | || | || || | || ||| |||||||| || || ||||| | |
Sbjct 557020 GATTCTTGCGAAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGG 557079
Query 116888 CGA 116890
|||
Sbjct 557080 CGA 557082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507000610160
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