Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 2e-15 >seq1 Length=8525130 Score = 98.7 bits (108), Expect = 2e-15 Identities = 444/687 (65%), Gaps = 24/687 (3%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAG--GCCTGCTT-CTCAGATAGTACAT 203895 || ||| || ||||||||||||| |||||| ||||| | | || |||||||| Sbjct 555707 CTGGTCGACGGTGAACTGAATGGGAG---CGGCAGCAGCCTGGGTACGGAGGTAGTACAT 555763 Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955 ||||||||| || || || ||| ||| | ||||||| | | |||| || | | Sbjct 555764 GCCGGTCTTGAGACCGAGCTTCCAACCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGT 555823 Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTG 204014 ||| || |||||| ||||||| ||||| ||||||||| ||||| || || || | Sbjct 555824 GGGCTCACGCATGTGGATGTTCAAGGACTGAGACTGGTCGATG-AAGGCACCACGGTCGG 555882 Query 204015 CGGCCATATTGATAA--TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCT 204072 | | ||| | || || ||| ||| ||||||||||| || |||||| | | | | | Sbjct 555883 CAGACATCTGGACAACCTGG--CGCTGGGAAATCTCCCAAACAGTCTTGTAAAGGGCCTT 555940 Query 204073 GGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCA 204131 | ||| ||| | | | | || ||| || || ||||| || || || | | Sbjct 555941 GATGTCGGCAGGGATGT-TGGGGATGTTCTGAATAGATCCGTTCTCAGCAATGATACGGT 555999 Query 204132 TCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGA 204191 || || | | || ||||| ||||| || || ||| | || |||||| | Sbjct 556000 TCTTCATGGCATCAGACCACAAGCCCATGTCGACAAGATCCTTGAGCAACCAGGGGTTAA 556059 Query 204192 TGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGA 204251 | ||| || || || | || || | || | | | |||| ||| | || |||| Sbjct 556060 CAACCTGGAACTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGAAGTGTAGGGCTCGA 556119 Query 204252 ACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCA 204311 | ||| |||||||| | |||||| | ||| || || ||||||||||| || | || Sbjct 556120 AGCACTCATTGTTGCCAAGAATCTGCGAGGTAGATGCAGTAGGCATGGGAGCAAGCAACA 556179 Query 204312 GGGAGTTGCGCACACCGTATTTTTGGACCCTGC-GCTTCAGAGAGGTCCAGTCGTGCATC 204370 |||||||| | ||||| | | || ||||| ||| || ||| || | Sbjct 556180 AAGAGTTGCGGATACCGTGCTCCTTGA-CCTGCTCCTTGAGGCTATCCCACTCCCAGAGG 556238 Query 204371 GCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCC 204430 | ||||| || || |||||||||||| || | ||| || | | | | || |||| Sbjct 556239 TCGCTGGGCTTGACATTCCACATGTCGAATTGGAGGATACCCTCAGAGGCGGGAGAGCCC 556298 Query 204431 TTGTACGTCGGATAAGGCTGATCCTCTTC---TGCCAGCTTGCAC-GAGGCGGCCATGGC 204486 ||| | || | || | || ||||||| |||| | ||||| ||||| | | ||| Sbjct 556299 TTGAAAGTAGAGTAGG---GACCCTCTTCCTTGGCCAAC-TGCACAGAGGCAGTGACGGC 556354 Query 204487 GTGATAGTACATGGTCTCAAAGATCTG 204513 | ||| |||||||| || ||||| Sbjct 556355 AGCGTGGTAGATGGTCTCGAAAATCTG 556381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154941574560