Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq3 134 3e-26 seq7 125 2e-23 seq1 95.1 3e-14 >seq3 Length=4610873 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || || ||||| |||||| || | ||||||||||| | ||| | |||||| Sbjct 3673207 AGGACGAGATGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCT 3673266 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| ||||| |||||||| ||| ||| || || ||| Sbjct 3673267 TCAAGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCAGGAGGAATACCCTCCTTATCC 3673326 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| ||| || | | || || ||||| ||||||||| Sbjct 3673327 TGAATCTTCGACTTGACGTTGTCGATGGTATCAGAAGACTCAACCTCCAATGTGATCGTC 3673386 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || ||||| || Sbjct 3673387 TTGCCGGTGAGGGTCTTGACGAAAATCTG 3673415 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || | ||| ||||| |||||||| || | ||||||||| || ||| Sbjct 3673426 CGGAGACGCAGCACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTG 3673485 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| ||||| ||||| ||||||||||| || ||| || || Sbjct 3673486 CGACCGTCCTCGAGCTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGGGATACCC 3673545 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || |||||| ||| || |||| ||||| | || || || || || Sbjct 3673546 TCCTTATCTTGGATCTTTGACTTGACATTGTCGATTGTGTCCGATGACTCAACTTCTAAT 3673605 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || ||||| || ||||| ||||| Sbjct 3673606 GTAATAGTCTTGCCAGTAAGAGTCTTGACAAAGATTTG 3673643 Score = 98.7 bits (108), Expect = 2e-15 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| |||||||| || |||||| || | |||||| |||| | || Sbjct 3673882 CGAAGGCGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAGAGGGTG 3673941 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || ||||| || || ||||||||||| || |||||| Sbjct 3673942 CGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGGGGAATTCCC 3674001 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| ||| || | |||||| | | || || || | Sbjct 3674002 TCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCGAGG 3674061 Query 199589 GTGATCGTCTTACCCGTGA 199607 || || ||||| || |||| Sbjct 3674062 GTAATGGTCTTGCCGGTGA 3674080 Score = 84.2 bits (92), Expect = 5e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || || || || || ||||| |||| ||||||||| | | || | |||||| Sbjct 3673663 AGAACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCT 3673722 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||| || || || ||||||||||| ||| || || || ||| Sbjct 3673723 TCAAGCTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 3673782 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | ||||| | | || || || | || || ||| Sbjct 3673783 TGGATCTTCGACTTGACGTTGTCAATAGTGTCGGAAGACTCAACCTCGAGGGTAATGGTC 3673842 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | ||| || || || || || Sbjct 3673843 TTTCCGGTCAAAGTCTTGACGAAGATCTG 3673871 >seq7 Length=1200748 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||||||||| |||||||| |||| ||||||||| | | || | ||||| Sbjct 1041550 AGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1041491 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| || ||||||||||| || || || || ||| Sbjct 1041490 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTATCC 1041431 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || || | |||||| | | || || || | ||||||||| Sbjct 1041430 TGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 1041371 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || ||||| || Sbjct 1041370 TTTCCCGTAAGGGTCTTGACGAAAATCTG 1041342 >seq1 Length=8525130 Score = 95.1 bits (104), Expect = 3e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | | || | ||||| || |||||||| || ||||||| Sbjct 1348138 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 1348079 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | || ||||||||||| || ||| || || ||||| ||||| ||| || | Sbjct 1348078 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 1348019 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | || || ||||||||||| || || ||||| | Sbjct 1348018 CGATGGTGTCCGAGGACTCGACCTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTCACGA 1347959 Query 199620 AA 199621 || Sbjct 1347958 AA 1347957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921207271742