Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 134 3e-26
seq7 125 2e-23
seq1 95.1 3e-14
>seq3
Length=4610873
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| || || ||||| |||||| || | ||||||||||| | ||| | ||||||
Sbjct 3673207 AGGACGAGATGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCT 3673266
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || || ||||| ||||| |||||||| ||| ||| || || |||
Sbjct 3673267 TCAAGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCAGGAGGAATACCCTCCTTATCC 3673326
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| ||| |||| ||| || | | || || ||||| |||||||||
Sbjct 3673327 TGAATCTTCGACTTGACGTTGTCGATGGTATCAGAAGACTCAACCTCCAATGTGATCGTC 3673386
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || ||||| ||
Sbjct 3673387 TTGCCGGTGAGGGTCTTGACGAAAATCTG 3673415
Score = 114 bits (126), Expect = 3e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | ||| || | ||| ||||| |||||||| || | ||||||||| || |||
Sbjct 3673426 CGGAGACGCAGCACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTG 3673485
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || |||||||| ||||| ||||| ||||||||||| || ||| || ||
Sbjct 3673486 CGACCGTCCTCGAGCTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGGGATACCC 3673545
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || || |||||| ||| || |||| ||||| | || || || || ||
Sbjct 3673546 TCCTTATCTTGGATCTTTGACTTGACATTGTCGATTGTGTCCGATGACTCAACTTCTAAT 3673605
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || ||||| || ||||| |||||
Sbjct 3673606 GTAATAGTCTTGCCAGTAAGAGTCTTGACAAAGATTTG 3673643
Score = 98.7 bits (108), Expect = 2e-15
Identities = 141/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||| |||||||| || |||||| || | |||||| |||| | ||
Sbjct 3673882 CGAAGGCGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAGAGGGTG 3673941
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || |||||||| || ||||| || || ||||||||||| || ||||||
Sbjct 3673942 CGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGGGGAATTCCC 3674001
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||| ||| || | |||||| | | || || || |
Sbjct 3674002 TCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCGAGG 3674061
Query 199589 GTGATCGTCTTACCCGTGA 199607
|| || ||||| || ||||
Sbjct 3674062 GTAATGGTCTTGCCGGTGA 3674080
Score = 84.2 bits (92), Expect = 5e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || || || || || || ||||| |||| ||||||||| | | || | ||||||
Sbjct 3673663 AGAACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCT 3673722
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| ||||| || || || ||||||||||| ||| || || || |||
Sbjct 3673723 TCAAGCTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 3673782
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| || | ||||| | | || || || | || || |||
Sbjct 3673783 TGGATCTTCGACTTGACGTTGTCAATAGTGTCGGAAGACTCAACCTCGAGGGTAATGGTC 3673842
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | ||| || || || || ||
Sbjct 3673843 TTTCCGGTCAAAGTCTTGACGAAGATCTG 3673871
>seq7
Length=1200748
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||||||||||||||| |||||||| |||| ||||||||| | | || | |||||
Sbjct 1041550 AGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1041491
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| || ||||||||||| || || || || |||
Sbjct 1041490 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTATCC 1041431
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || || | |||||| | | || || || | |||||||||
Sbjct 1041430 TGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 1041371
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || || || || ||||| ||
Sbjct 1041370 TTTCCCGTAAGGGTCTTGACGAAAATCTG 1041342
>seq1
Length=8525130
Score = 95.1 bits (104), Expect = 3e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| |||| ||||||||| | | || | ||||| || |||||||| || |||||||
Sbjct 1348138 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 1348079
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| || ||||||||||| || ||| || || ||||| ||||| ||| || |
Sbjct 1348078 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 1348019
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| |||||| | | || || || | || || ||||||||||| || || ||||| |
Sbjct 1348018 CGATGGTGTCCGAGGACTCGACCTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTCACGA 1347959
Query 199620 AA 199621
||
Sbjct 1347958 AA 1347957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921207271742
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |